SIGC (Arabidopsis lyrata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Al_scaffold_0005_2291 T323746_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0005_2291 Sigma 70 333 403

Links

Other Sigma 70 family TFs
Other Arabidopsis lyrata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R005791 Aptenodytes forsteri Afo_R005791 N
AMAM008322 Anopheles maculatus AMAM008322 N
ANCCAN_24295 Ancylostoma caninum ANCCAN_24295 N
ANCDUO_20204 Ancylostoma duodenale ANCDUO_20204 N
BTMF_0000932701 Brugia timori BTMF_0000932701 N
EEL_0001031901 Elaeophora elaphi EEL_0001031901 N
POU4F1 Taeniopygia guttata ENSTGUG00000005421 N
POU4F2 Takifugu rubripes ENSTRUG00000001400 N
GL14745 Drosophila persimilis FBgn0152349 N
genemark-nMf.1.1.scaf04821-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf04821-processed-gene-0.1 N
Gfo_R011132 Geospiza fortis Gfo_R011132 N
Hba_13069 Heterorhabditis bacteriophora Hba_13069 N
MESCA000014 Megaselia scalaris MESCA000014 N
nAv.1.0.1.g00376 Acanthocheilonema viteae nAv.1.0.1.g00376 N
nOo.2.0.1.g10764 Onchocerca ochengi nOo.2.0.1.g10764 N
OFLC_0001019101 Onchocerca flexuosa OFLC_0001019101 N
PPAI005468 Phlebotomus papatasi PPAI005468 N
SSLN_0001714501 Schistocephalus solidus SSLN_0001714501 N
SVUK_0000379901 Strongylus vulgaris SVUK_0000379901 N
TELCIR_22112 Teladorsagia circumcincta TELCIR_22112 N