CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr4G01060_001
(
Musa acuminata
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
GSMUA_Achr4G01060_001
T323860_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P01060_001
Sigma 70
336
406
LIKSTRSLVMFIAKNYRGMGIAFDDLLQAGYVGVLNGAERFDMKKGNRFSTYVQYWIRKSILAMVARHSRM
Links
Other
Sigma 70
family TFs
Other
Musa acuminata
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001881801
Diphyllobothrium latum
DILT_0001881801
N
EmuJ_000490500
Echinococcus multilocularis
EmuJ_000490500
N
HDID_0000092101
Hymenolepis diminuta
HDID_0000092101
N
HmN_000184500
Hymenolepis microstoma
HmN_000184500
N
HNAJ_0000048301
Hymenolepis nana
HNAJ_0000048301
N
MCOS_0000520501
Mesocestoides corti
MCOS_0000520501
N
SPER_0003269401
Spirometra erinaceieuropaei
SPER_0003269401
N
SSLN_0000030001
Schistocephalus solidus
SSLN_0000030001
N
TsM_000861500
Taenia solium
TsM_000861500
N
TTAC_0000783201
Hydatigera taeniaeformis
TTAC_0000783201
N