PGSC0003DMG400009072 (Solanum tuberosum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 PGSC0003DMG400009072 T323939_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400023432 Sigma 70 282 354

Links

Other Sigma 70 family TFs
Other Solanum tuberosum TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDP1 Aedes aegypti AAEL005255 I
AALB004300 Anopheles albimanus AALB004300 I
Aan_R004902 Calypte anna Aan_R004902 I
Aan_R013230 Calypte anna Aan_R013230 I
AARA000887 Anopheles arabiensis AARA000887 I
AATE006511 Anopheles atroparvus AATE006511 I
ACEP27179 Atta cephalotes ACEP27179 I
ACOM039838 Anopheles coluzzii ACOM039838 I
ACUA004794 Anopheles culicifacies ACUA004794 I
ADAC004162 Anopheles darlingi ADAC004162 I
ADIR007438 Anopheles dirus ADIR007438 I
AEPI005427 Anopheles epiroticus AEPI005427 I
AFAF017409 Anopheles farauti AFAF017409 I
Afo_R002997 Aptenodytes forsteri Afo_R002997 I
Afo_R007951 Aptenodytes forsteri Afo_R007951 I
AFUN000141 Anopheles funestus AFUN000141 I
PDP1 Anopheles gambiae AGAP006376 I
Alligator_sinensis_CCG007983.1 Alligator sinensis Alligator_sinensis_CCG007983.1 I
Alligator_sinensis_CCG020587.1 Alligator sinensis Alligator_sinensis_CCG020587.1 I
AMEM018156 Anopheles merus AMEM018156 I
AMIN007990 Anopheles minimus AMIN007990 I
AQUA000938 Anopheles quadriannulatus AQUA000938 I
ASIS001542 Anopheles sinensis ASIS001542 I
ASTEI09431 Anopheles stephensi ASTEI09431 I
BGIBMGA003874 Bombyx mori BGIBMGA003874 I
Brh_R008067 Buceros rhinoceros Brh_R008067 I
Brh_R010854 Buceros rhinoceros Brh_R010854 I
Cflo_03674--XP_391997.2_APIME Camponotus floridanus Cflo_03674--XP_391997.2_APIME I
CGI_10008414 Crassostrea gigas CGI_10008414 I
Cmyd_10013489 Chelonia mydas Cmyd_10013489 I
PDP1 Culex quinquefasciatus CPIJ014920 I
CpipJ_CPIJ014920 Culex pipiens CpipJ_CPIJ014920 I
TEF Anolis carolinensis ENSACAG00000004810 I
HLF Anolis carolinensis ENSACAG00000017417 I
ENSAMEG00000002146 Ailuropoda melanoleuca ENSAMEG00000002146 I
ENSAMEG00000014714 Ailuropoda melanoleuca ENSAMEG00000014714 I
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I
ENSAMXG00000009417 Astyanax mexicanus ENSAMXG00000009417 I
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I
ENSAMXG00000016053 Astyanax mexicanus ENSAMXG00000016053 I
ENSAMXG00000017639 Astyanax mexicanus ENSAMXG00000017639 I
ENSAPLG00000004386 Anas platyrhynchos ENSAPLG00000004386 I
ENSAPLG00000005838 Anas platyrhynchos ENSAPLG00000005838 I
HLF Bos taurus ENSBTAG00000006618 I
TEF Bos taurus ENSBTAG00000016580 I
ENSBTAP00000008682-D1 Bos grunniens ENSBTAP00000008682-D1 I
ENSBTAP00000022056-D1 Bos grunniens ENSBTAP00000022056-D1 I
TEF Canis familiaris ENSCAFG00000001095 I
HLF Canis familiaris ENSCAFG00000030851 I
ENSCHOG00000001396 Choloepus hoffmanni ENSCHOG00000001396 I
TEF Choloepus hoffmanni ENSCHOG00000009442 I
TEF Callithrix jacchus ENSCJAG00000004977 I
HLF Callithrix jacchus ENSCJAG00000011298 I
ENSCPOG00000011000 Cavia porcellus ENSCPOG00000011000 I
TEF Cavia porcellus ENSCPOG00000020591 I
ENSCSAG00000005557 Chlorocebus sabaeus ENSCSAG00000005557 I
ENSCSAG00000005816 Chlorocebus sabaeus ENSCSAG00000005816 I
tefa Danio rerio ENSDARG00000039117 I
hlfb Danio rerio ENSDARG00000061011 I
dbpa Danio rerio ENSDARG00000063014 I
hlfa Danio rerio ENSDARG00000074752 I
tefb Danio rerio ENSDARG00000098103 I
TEF Dasypus novemcinctus ENSDNOG00000035257 I
ENSDORG00000012644 Dipodomys ordii ENSDORG00000012644 I
Tef Dipodomys ordii ENSDORG00000014982 I
HLF Equus caballus ENSECAG00000016953 I
TEF Equus caballus ENSECAG00000018137 I
HLF Erinaceus europaeus ENSEEUG00000010964 I
HLF Echinops telfairi ENSETEG00000017670 I
ENSFALG00000002265 Ficedula albicollis ENSFALG00000002265 I
ENSFALG00000011967 Ficedula albicollis ENSFALG00000011967 I
TEF Felis catus ENSFCAG00000003674 I
HLF Felis catus ENSFCAG00000022556 I
HLF Homo sapiens ENSG00000108924 D
TEF Homo sapiens ENSG00000167074 D
tefa Gasterosteus aculeatus ENSGACG00000004793 I
tefb Gasterosteus aculeatus ENSGACG00000007628 I
hlfb Gasterosteus aculeatus ENSGACG00000010103 I
HLF Gallus gallus ENSGALG00000003059 I
TEF Gallus gallus ENSGALG00000011958 I
HLF Gorilla gorilla ENSGGOG00000006075 I
TEF Gorilla gorilla ENSGGOG00000016460 I
ENSGMOG00000004830 Gadus morhua ENSGMOG00000004830 I
ENSGMOG00000013327 Gadus morhua ENSGMOG00000013327 I
ENSGMOG00000014488 Gadus morhua ENSGMOG00000014488 I
ENSLACG00000012701 Latimeria chalumnae ENSLACG00000012701 I
ENSLACG00000012726 Latimeria chalumnae ENSLACG00000012726 I
TEF Loxodonta africana ENSLAFG00000013151 I
HLF Loxodonta africana ENSLAFG00000016475 I
ENSLOCG00000011595 Lepisosteus oculatus ENSLOCG00000011595 I
ENSLOCG00000012233 Lepisosteus oculatus ENSLOCG00000012233 I
ENSMEUG00000013604 Macropus eugenii ENSMEUG00000013604 I
ENSMEUG00000016384 Macropus eugenii ENSMEUG00000016384 I
TEF Meleagris gallopavo ENSMGAG00000012262 I
ENSMICG00000002860 Microcebus murinus ENSMICG00000002860 I
ENSMICG00000013518 Microcebus murinus ENSMICG00000013518 I
TEF Myotis lucifugus ENSMLUG00000002459 I
HLF Myotis lucifugus ENSMLUG00000007393 I
TEF Macaca mulatta ENSMMUG00000005221 I
HLF Macaca mulatta ENSMMUG00000022627 I
HLF Monodelphis domestica ENSMODG00000014851 I
TEF Monodelphis domestica ENSMODG00000016547 I
ENSMPUG00000015400 Mustela putorius furo ENSMPUG00000015400 I
ENSMPUG00000016407 Mustela putorius furo ENSMPUG00000016407 I
Hlf Mus musculus ENSMUSG00000003949 D
Tef Mus musculus ENSMUSG00000022389 D
ENSNLEG00000007993 Nomascus leucogenys ENSNLEG00000007993 I
ENSNLEG00000015473 Nomascus leucogenys ENSNLEG00000015473 I
HLF Ornithorhynchus anatinus ENSOANG00000010288 I
TEF Ornithorhynchus anatinus ENSOANG00000011535 I
ENSOARG00000018238 Ovis aries ENSOARG00000018238 I
HLF Oryctolagus cuniculus ENSOCUG00000010547 I
TEF Oryctolagus cuniculus ENSOCUG00000012866 I
HLF Otolemur garnettii ENSOGAG00000007056 I
TEF Otolemur garnettii ENSOGAG00000025997 I
ENSONIG00000007041 Oreochromis niloticus ENSONIG00000007041 I
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I
ENSONIG00000012778 Oreochromis niloticus ENSONIG00000012778 I
ENSONIG00000019079 Oreochromis niloticus ENSONIG00000019079 I
ENSONIG00000019694 Oreochromis niloticus ENSONIG00000019694 I
HLF Ochotona princeps ENSOPRG00000004195 I
TEF Ochotona princeps ENSOPRG00000013592 I
hlfa Oryzias latipes ENSORLG00000000969 I
tefa Oryzias latipes ENSORLG00000002582 I
ENSORLG00000011412 Oryzias latipes ENSORLG00000011412 I
tefb Oryzias latipes ENSORLG00000014144 I
ENSP00000226067 Macaca fascicularis ENSP00000226067 I
ENSP00000403078 Macaca fascicularis ENSP00000403078 I
ENSPANG00000022360 Papio anubis ENSPANG00000022360 I
ENSPANG00000024579 Papio anubis ENSPANG00000024579 I
ENSPFOG00000004560 Poecilia formosa ENSPFOG00000004560 I
ENSPFOG00000007430 Poecilia formosa ENSPFOG00000007430 I
ENSPFOG00000010189 Poecilia formosa ENSPFOG00000010189 I
ENSPFOG00000013950 Poecilia formosa ENSPFOG00000013950 I
ENSPFOG00000016821 Poecilia formosa ENSPFOG00000016821 I
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I
ENSPPYG00000008257 Pongo abelii ENSPPYG00000008257 I
ENSPPYG00000011867 Pongo abelii ENSPPYG00000011867 I
ENSPSIG00000006835 Pelodiscus sinensis ENSPSIG00000006835 I
ENSPSIG00000016356 Pelodiscus sinensis ENSPSIG00000016356 I
HLF Pan troglodytes ENSPTRG00000009424 I
TEF Pan troglodytes ENSPTRG00000014425 I
TEF Pteropus vampyrus ENSPVAG00000001160 I
HLF Pteropus vampyrus ENSPVAG00000007461 I
Hlf Rattus norvegicus ENSRNOG00000002456 I
Tef Rattus norvegicus ENSRNOG00000019383 I
TEF Sorex araneus ENSSARG00000003323 I
ENSSARG00000013841 Sorex araneus ENSSARG00000013841 I
ENSSHAG00000009361 Sarcophilus harrisii ENSSHAG00000009361 I
ENSSHAG00000015304 Sarcophilus harrisii ENSSHAG00000015304 I
ENSSTOG00000019642 Ictidomys tridecemlineatus ENSSTOG00000019642 I
ENSSTOG00000029018 Ictidomys tridecemlineatus ENSSTOG00000029018 I
HLF Tupaia belangeri ENSTBEG00000006958 I
TEF Tupaia belangeri ENSTBEG00000010576 I
HLF Taeniopygia guttata ENSTGUG00000009478 I
TEF Taeniopygia guttata ENSTGUG00000009944 I
ENSTNIG00000002167 Tetraodon nigroviridis ENSTNIG00000002167 I
ENSTNIG00000003545 Tetraodon nigroviridis ENSTNIG00000003545 I
ENSTNIG00000004400 Tetraodon nigroviridis ENSTNIG00000004400 I
ENSTNIG00000008098 Tetraodon nigroviridis ENSTNIG00000008098 I
hlfa Tetraodon nigroviridis ENSTNIG00000011274 I
tefa Tetraodon nigroviridis ENSTNIG00000012940 I
tefb Takifugu rubripes ENSTRUG00000003565 I
hlfa Takifugu rubripes ENSTRUG00000003731 I
ENSTRUG00000003893 Takifugu rubripes ENSTRUG00000003893 I
hlfb Takifugu rubripes ENSTRUG00000003909 I
ENSTRUG00000007098 Takifugu rubripes ENSTRUG00000007098 I
tefa Takifugu rubripes ENSTRUG00000017028 I
ENSTSYG00000008965 Tarsius syrichta ENSTSYG00000008965 I
ENSTSYG00000009210 Tarsius syrichta ENSTSYG00000009210 I
TEF Tursiops truncatus ENSTTRG00000003365 I
HLF Tursiops truncatus ENSTTRG00000007194 I
TEF Vicugna pacos ENSVPAG00000002612 I
ENSXMAG00000000678 Xiphophorus maculatus ENSXMAG00000000678 I
ENSXMAG00000012054 Xiphophorus maculatus ENSXMAG00000012054 I
ENSXMAG00000012903 Xiphophorus maculatus ENSXMAG00000012903 I
ENSXMAG00000016939 Xiphophorus maculatus ENSXMAG00000016939 I
e_gw.24.282.1 Branchiostoma floridae e_gw.24.282.1 I
e_gw.273.32.1 Branchiostoma floridae e_gw.273.32.1 I
e_gw.273.54.1 Branchiostoma floridae e_gw.273.54.1 I
GB43643 Apis mellifera GB43643 I
Gfo_R004744 Geospiza fortis Gfo_R004744 I
Gfo_R006518 Geospiza fortis Gfo_R006518 I
HHAL005759-PA Halyomorpha halys HHAL005759-PA I
HMEL011029 Heliconius melpomene HMEL011029 I
Hsal_12188--XP_391997.2_APIME Harpegnathos saltator Hsal_12188--XP_391997.2_APIME I
ISCW004978 Ixodes scapularis ISCW004978 I
KGM_21614 Danaus plexippus KGM_21614 I
LLOJ006612 Lutzomyia longipalpis LLOJ006612 I
MCINX004280 Melitaea cinxia MCINX004280 I
Myotis_brandtii_Hlf_10020713 Myotis brandtii Myotis_brandtii_Hlf_10020713 I
Myotis_brandtii_Tef_10013968 Myotis brandtii Myotis_brandtii_Tef_10013968 I
NV13265 Nasonia vitripennis NV13265 I
Ocbimv22024947m.g Octopus bimaculoides Ocbimv22024947m.g I
Ogr00037 Ophisaurus gracilis Ogr00037 I
Ogr14443 Ophisaurus gracilis Ogr14443 I
PPAI002842 Phlebotomus papatasi PPAI002842 I
Pvit_00680 Pogona vitticeps Pvit_00680 I
Pvit_18616 Pogona vitticeps Pvit_18616 I
SMAR002779 Strigamia maritima SMAR002779 I
SPU_004414 Strongylocentrotus purpuratus SPU_004414 I
Tal_R002658 Tyto alba Tal_R002658 I
Tal_R009182 Tyto alba Tal_R009182 I
tetur19g00770 Tetranychus urticae tetur19g00770 I
dbp.L Xenopus laevis XB-GENE-6256610 I
hlf Xenopus tropicalis XB-GENE-955698 I
tef Xenopus tropicalis XB-GENE-962732 I
tef.S Xenopus laevis XB-GENE-962737 I
XP_002937859 Xenopus tropicalis XP_002937859 I
YQE_01842 Dendroctonus ponderosae YQE_01842 I