POPTR_0019s06100 (Populus trichocarpa)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 POPTR_0019s06100 T323961_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s06100.1 Sigma 70 321 391

Links

Other Sigma 70 family TFs
Other Populus trichocarpa TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_kg.C_90390 Phytophthora capsici estExt_fgenesh1_kg.C_90390 N
F443_16830 Phytophthora parasitica F443_16830 N
fgenesh_scip_prom.28083.2092 Phytophthora lateralis fgenesh_scip_prom.28083.2092 N
fgenesh_scip_prom.46568.6853 Phytophthora kernoviae fgenesh_scip_prom.46568.6853 N
Phyra84537 Phytophthora ramorum Phyra84537 N
Physo142765 Phytophthora sojae Physo142765 N
PITG_17552 Phytophthora infestans PITG_17552 N
PITG_17554 Phytophthora infestans PITG_17554 N
PYU1_G006458 Pythium ultimum PYU1_G006458 N
PYU1_G009002 Pythium ultimum PYU1_G009002 N