CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla018594
(
Citrullus lanatus
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Cla018594
T324057_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla018594
Sigma 70
322
392
LINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRT
Links
Other
Sigma 70
family TFs
Other
Citrullus lanatus
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
11216_YIR013C
Saccharomyces mikatae
11216_YIR013C
I
11228_YIR013C
Saccharomyces bayanus
11228_YIR013C
I
22393_YLR013W
Saccharomyces mikatae
22393_YLR013W
I
23312_YLR013W
Saccharomyces paradoxus
23312_YLR013W
I
25647_YIR013C
Saccharomyces bayanus
25647_YIR013C
I
SKUD_156803
Saccharomyces kudriavzevii
SKUD_156803
I
SU7_1663
Saccharomyces arboricola
SU7_1663
I
GAT4
Saccharomyces cerevisiae
YIR013C
D