CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
e_gw1.6.1215.1
(
Ostreococcus RCC809
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
e_gw1.6.1215.1
T324105_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.6.1215.1
Sigma 70
113
183
MIQANLRLVVSIAKKYANTNMSFQDLIQEGCVGLIRGAEKFDFERGYKFSTYAHWWIRQAVTRSISDQSRT
Links
Other
Sigma 70
family TFs
Other
Ostreococcus RCC809
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_08103
Aspergillus nidulans
CADANIAG00004135
N
F503_00517
Ophiostoma piceae uamh
F503_00517
N
FFUJ_08303
Fusarium fujikuroi
FFUJ_08303
N
FOXG_12831
Fusarium oxysporum
FOXG_12831
N
FPSE_09808
Fusarium pseudograminearum
FPSE_09808
N
H072_620
Dactylellina haptotyla
H072_620
N
THITE_74161
Thielavia terrestris
THITE_74161
N