orange1.1g046578m.g (Citrus sinensis)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 orange1.1g046578m.g T324226_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g046578m Sigma 70 146 216

Links

Other Sigma 70 family TFs
Other Citrus sinensis TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_07021 Exophiala aquamarina A1O9_07021 N 0.000
ACRE_069230 Acremonium chrysogenum ACRE_069230 N 0.000
BBA_07453 Beauveria bassiana BBA_07453 N 0.000
BBA_08510 Beauveria bassiana BBA_08510 N 0.000
CADANGAG00001928 Aspergillus niger CADANGAG00001928 N 0.000
CCM_04496 Cordyceps militaris CCM_04496 N 0.000
CGGC5_11092 Colletotrichum gloeosporioides CGGC5_11092 N 0.000
CH063_13215 Colletotrichum higginsianum CH063_13215 N 0.000
CHGG_00926 Chaetomium globosum CHGG_00926 N 0.000
CHGG_08269 Chaetomium globosum CHGG_08269 N 0.000
Cob_05129 Colletotrichum orbiculare Cob_05129 N 0.000
CSUB01_10231 Colletotrichum sublineola CSUB01_10231 N 0.000
e_gw1.34.5.1 Cochliobolus heterostrophus C5 e_gw1.34.5.1 N 0.000
F503_02724 Ophiostoma piceae uamh F503_02724 N 0.000
fgenesh1_pg.C_scaffold_9000410 Cryphonectria parasitica fgenesh1_pg.C_scaffold_9000410 N 0.000
HMPREF1120_04133 Exophiala dermatitidis HMPREF1120_04133 N 0.000
LEMA_P047880.1 Leptosphaeria maculans LEMA_P047880.1 N 0.000
M437DRAFT_47167 Aureobasidium melanogenum M437DRAFT_47167 N 0.000
MBM_01548 Marssonina brunnea MBM_01548 N 0.000
MCYG_08710 Microsporum canis MCYG_08710 N 0.000
MCYG_08710 Arthroderma otae MCYG_08710 N 0.000
OIDMADRAFT_120194 Oidiodendron maius OIDMADRAFT_120194 N 0.000
PEX1_085400 Penicillium expansum PEX1_085400 N 0.000
PODANS_3_4320 Podospora anserina PODANS_3_4320 N 0.000
PV06_08153 Exophiala oligosperma PV06_08153 N 0.000
S40285_05664 Stachybotrys chlorohalonata S40285_05664 N 0.000
S40285_09207 Stachybotrys chlorohalonata S40285_09207 N 0.000
S40288_04224 Stachybotrys chartarum S40288_04224 N 0.000
SS1G_02247 Sclerotinia sclerotiorum SS1G_02247 N 0.000
TSTA_058560 Talaromyces stipitatus TSTA_058560 N 0.000
V499_08790 Pseudogymnoascus pannorum V499_08790 N 0.000
VHEMI08510 Torrubiella hemipterigena VHEMI08510 N 0.000
Z517_00801 Fonsecaea pedrosoi Z517_00801 N 0.000