Pavir.Fb00544 (Panicum virgatum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Pavir.Fb00544 T324227_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb00544.1.p Sigma 70 260 330

Links

Other Sigma 70 family TFs
Other Panicum virgatum TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07741 Capronia coronata A1O1_07741 N
A1O3_09950 Capronia epimyces A1O3_09950 N
A1O5_05391 Cladophialophora psammophila A1O5_05391 N
A1O7_06554 Cladophialophora yegresii A1O7_06554 N
A1O9_07672 Exophiala aquamarina A1O9_07672 N
CMQ_2329 Grosmannia clavigera CMQ_2329 N
F503_07098 Ophiostoma piceae uamh F503_07098 N
G647_05981 Cladophialophora carrionii G647_05981 N
HMPREF1541_00735 Cyphellophora europaea HMPREF1541_00735 N
PFICI_00936 Pestalotiopsis fici PFICI_00936 N
PMAA_062410 Penicillium marneffei PMAA_062410 N
PMAA_062410 Talaromyces marneffei PMAA_062410 N
PV04_06957 Capronia semiimmersa PV04_06957 N
PV05_08275 Exophiala xenobiotica PV05_08275 N
PV06_01996 Exophiala oligosperma PV06_01996 N
PV07_03068 Cladophialophora immunda PV07_03068 N
PV08_02866 Exophiala spinifera PV08_02866 N
PV10_08334 Exophiala mesophila PV10_08334 N
PV11_06360 Exophiala sideris PV11_06360 N
Z517_05581 Fonsecaea pedrosoi Z517_05581 N
Z518_05925 Rhinocladiella mackenziei Z518_05925 N
Z519_08265 Cladophialophora bantiana Z519_08265 N