CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

smad4a *(Gasterosteus aculeatus)* SMAD
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03165 (MH1)	IPR003619	ENSGACG00000007495	T324636_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Smad4 M05889_2.00	Mus musculus	KCYAGACR	YGTCTRGM	SMiLE-seq Isakova et al.(2017) Smad4	0.980	0.980
SMAD4 M09377_2.00	Homo sapiens	DRGTGNSAGACWN	NWGTCTSNCACYH	Misc Kulakovskiy et al.(2013) SMAD4_HUMAN.H11MO.0.B	0.980	0.980
Smad4 M09382_2.00	Mus musculus	DGWGNBAGVCWN	NWGBCTVNCWCH	Misc Kulakovskiy et al.(2013) SMAD4_MOUSE.H11MO.0.A	0.980	0.980
SMAD4 M09634_2.00	Homo sapiens	NNNYGTCTGS	SCAGACRNNN	Misc Heinz et al.(2010) ESC-SMAD4_GSE29422	0.980	0.980
SMAD4 M11275_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SMAD4_Q4	0.980	0.980
SMAD4 M11276_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SMAD4_Q6_01	0.980	0.980
SMAD4 M11277_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SMAD4_Q6	0.980	0.980
Med M06447_2.00	Drosophila melanogaster	KCGBCDKKSHVT	ABDSMMHGVCGM	B1H Zhu et al.(2011) Med_FlyReg_FBgn0011655	0.961	0.961
Med M09693_2.00	Drosophila melanogaster	YYBYVYCTGYY	RRCAGRBRVRR	Misc Kulakovskiy et al.(2009) Med	0.961	0.961
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSGACP00000009949	SMAD	34	135	AKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQFAFDLKCDNVCVNPYHYERVV
ENSGACP00000009957	SMAD	33	134	AKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQFAFDLKCDNVCVNPYHYERVV

Links
Other SMAD family TFs
Other *Gasterosteus aculeatus* TFs

204 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
MAC_07212	Metarhizium acridum	MAC_07212	N	0.000
MGU_01553	Metarhizium guizhouense	MGU_01553	N	0.000
TRIATDRAFT_139368	Trichoderma atroviride	TRIATDRAFT_139368	N	0.000
X797_008902	Metarhizium robertsii	X797_008902	N	0.000