CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Mad
(
Drosophila melanogaster
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
FBgn0011648
T325046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mad
M06446_2.00
Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC
B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648
(Direct)
(Direct)
Mad
M08427_2.00
Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS
ChIP-chip
Mathelier et al.(2014)
MA0535.1
(Direct)
(Direct)
Mad
M09692_2.00
Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM
Misc
Kulakovskiy et al.(2009)
Mad
(Direct)
(Direct)
Mad
M11293_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$MAD_Q6
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMAD9
M11274_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_01
0.912
0.912
Smad9
M11290_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_02
0.912
0.912
Smad9
M11289_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_03
0.912
0.912
SMAD1
M11286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_01
0.902
0.902
SMAD1
M11287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_Q6
0.902
0.902
Smad5
M11288_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_01
0.892
0.892
Smad5
M11292_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_03
0.892
0.892
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0077302
SMAD
44
145
AEKAVDSLVKKLKKRKGAIEELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLELCQYPFSAKQKEVCINPYHYKRVE
FBpp0304648
SMAD
114
215
AEKAVDSLVKKLKKRKGAIEELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLELCQYPFSAKQKEVCINPYHYKRVE
Links
Other
SMAD
family TFs
Other
Drosophila melanogaster
TFs
468 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_02048
Chaetomium globosum
CHGG_02048
I
CTHT_0074260
Chaetomium thermophilum
CTHT_0074260
I
estExt_fgenesh3_pm.C_40010
Neurospora discreta
estExt_fgenesh3_pm.C_40010
I
fgenesh1_pg.C_scaffold_4000918
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_4000918
I
MAC_05493
Metarhizium acridum
MAC_05493
I
MAJ_05920
Metarhizium majus
MAJ_05920
I
MAM_07413
Metarhizium album
MAM_07413
N
MANI_000381
Metarhizium anisopliae
MANI_000381
I
MBR_00157
Metarhizium brunneum
MBR_00157
I
MGG_01853
Magnaporthe oryzae
MGG_01853
N
MGU_09664
Metarhizium guizhouense
MGU_09664
I
MYCTH_2307931
Myceliophthora thermophila
MYCTH_2307931
I
NCU08634
Neurospora crassa
NCU08634
D
NEUTE1DRAFT_127029
Neurospora tetrasperma
NEUTE1DRAFT_127029
I
PFICI_03083
Pestalotiopsis fici
PFICI_03083
I
PODANS_1_230
Podospora anserina
PODANS_1_230
I
SAPIO_CDS1284
Scedosporium apiospermum
SAPIO_CDS1284
I
SMAC_09090
Sordaria macrospora
SMAC_09090
I
VDAG_06269
Verticillium dahliae
VDAG_06269
I
VDBG_09975
Verticillium alfalfae
VDBG_09975
I
VDBG_09975
Verticillium albo atrum
VDBG_09975
I
VHEMI05092
Torrubiella hemipterigena
VHEMI05092
I
X797_002511
Metarhizium robertsii
X797_002511
I