CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_013060
(
Schistosoma mansoni
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
Smp_013060
T325201_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mad
M06446_2.00
Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC
B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648
0.863
0.863
Mad
M08427_2.00
Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS
ChIP-chip
Mathelier et al.(2014)
MA0535.1
0.863
0.863
Mad
M09692_2.00
Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM
Misc
Kulakovskiy et al.(2009)
Mad
0.863
0.863
Mad
M11293_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$MAD_Q6
0.863
0.863
Smad5
M11288_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_01
0.853
0.853
Smad5
M11292_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_03
0.853
0.853
SMAD9
M11274_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_01
0.853
0.853
Smad9
M11290_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_02
0.853
0.853
Smad9
M11289_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_03
0.853
0.853
SMAD1
M11286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_01
0.843
0.843
SMAD1
M11287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_Q6
0.843
0.843
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_013060.1:pep
SMAD
35
136
AEKAVDSLVKKLKKKKGALEALERALSNPGEPSECVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDFCRFPFSAKENEVCINPYHYQRVE
Links
Other
SMAD
family TFs
Other
Schistosoma mansoni
TFs
433 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bteb2
Drosophila melanogaster
FBgn0025679
D
GA15529
Drosophila pseudoobscura
FBgn0075546
I
GF20344
Drosophila ananassae
FBgn0097351
I
GG18517
Drosophila erecta
FBgn0110730
I
GH12832
Drosophila grimshawi
FBgn0120311
I
GL13099
Drosophila persimilis
FBgn0150705
I
GD16275
Drosophila simulans
FBgn0187902
I
GJ18948
Drosophila virilis
FBgn0206094
I
GK25311
Drosophila willistoni
FBgn0227270
I
GE16834
Drosophila yakuba
FBgn0234326
I
LCUP009327
Lucilia cuprina
LCUP009327
I
MDOA001323
Musca domestica
MDOA001323
I
MDOA011460
Musca domestica
MDOA011460
I