smad1 (Xenopus tropicalis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 XB-GENE-1018193 T325428_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.990 0.990
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.990 0.990
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.951 0.951
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.951 0.951
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.941 0.941
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.941 0.941
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.941 0.941
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.912 0.912
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.912 0.912
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.912 0.912
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.912 0.912
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH75458 SMAD 30 131

Links

Other SMAD family TFs
Other Xenopus tropicalis TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015342 Calypte anna Aan_R015342 N
Brh_R011790 Buceros rhinoceros Brh_R011790 N
ENSAPLG00000005524 Anas platyrhynchos ENSAPLG00000005524 N
NFX1 Bos taurus ENSBTAG00000012385 N
NFX1 Canis familiaris ENSCAFG00000001848 N
NFX1 Cavia porcellus ENSCPOG00000003470 N
ENSCSAG00000009971 Chlorocebus sabaeus ENSCSAG00000009971 N
ENSFALG00000013143 Ficedula albicollis ENSFALG00000013143 N
NFX1 Homo sapiens ENSG00000086102 N
si:dkey-10f23.2 Gasterosteus aculeatus ENSGACG00000004560 N
NFX1 Gorilla gorilla ENSGGOG00000006751 N
ENSGMOG00000006198 Gadus morhua ENSGMOG00000006198 N
ENSLACG00000000769 Latimeria chalumnae ENSLACG00000000769 N
ENSLOCG00000011211 Lepisosteus oculatus ENSLOCG00000011211 N
NFX1 Myotis lucifugus ENSMLUG00000011069 N
ENSNLEG00000005096 Nomascus leucogenys ENSNLEG00000005096 N
ENSP00000368856 Macaca fascicularis ENSP00000368856 N
ENSP00000368856-D1 Bos grunniens ENSP00000368856-D1 N
ENSPANG00000025304 Papio anubis ENSPANG00000025304 N
ENSPFOG00000012547 Poecilia formosa ENSPFOG00000012547 N
ENSPPYG00000019136 Pongo abelii ENSPPYG00000019136 N
NFX1 Pan troglodytes ENSPTRG00000020858 N
NFX1 Pteropus vampyrus ENSPVAG00000011479 N
si:dkey-10f23.2 Takifugu rubripes ENSTRUG00000009872 N
ENSXMAG00000001963 Xiphophorus maculatus ENSXMAG00000001963 N
Myotis_brandtii_NFX1_10010343 Myotis brandtii Myotis_brandtii_NFX1_10010343 N
Tal_R011854 Tyto alba Tal_R011854 N
XP_002935327 Xenopus tropicalis XP_002935327 N