CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TRE_0000914801 *(Trichobilharzia regenti)* SMAD
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03165 (MH1)	IPR003619	TRE_0000914801	T325971_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Mad M06446_2.00	Drosophila melanogaster	GYGHCGBCVS	SBGVCGDCRC	B1H Zhu et al.(2011) Mad_FlyReg_FBgn0011648	0.703	0.703
Mad M08427_2.00	Drosophila melanogaster	SNGRCGMSRVSRBNS	SNVYSBYSKCGYCNS	ChIP-chip Mathelier et al.(2014) MA0535.1	0.703	0.703
Mad M09692_2.00	Drosophila melanogaster	KCBGSHGKCGCSNC	GNSGCGMCDSCVGM	Misc Kulakovskiy et al.(2009) Mad	0.703	0.703
Mad M11293_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$MAD_Q6	0.703	0.703
SMAD9 M11274_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SMAD8_01	0.703	0.703
Smad9 M11290_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SMAD8_02	0.703	0.703
Smad9 M11289_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SMAD8_03	0.703	0.703
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
TRE_0000914801-mRNA-1	SMAD	35	121	AEKAVDSLVKKLKKKKGALEALERALSNPGEPSECVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEFXXXXXXXX
TRE_0000914801-mRNA-1	SMAD	137	162	XXXXRFPFSAKENEVCINPYHYQRVE

Links
Other SMAD family TFs
Other *Trichobilharzia regenti* TFs