CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CpipJ_CPIJ018938
(
Culex pipiens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
CpipJ_CPIJ018938
T326067_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ018938-RA
Sox
190
238
ETKEPQEIRSQIKSLLEHWAKLSESQNESYQRRAADAVVKYREDMPKWE
Links
Other
Sox
family TFs
Other
Culex pipiens
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG12674
Caenorhabditis briggsae
CBG12674
I
CRE23561
Caenorhabditis remanei
CRE23561
I
HPLM_0001518701
Haemonchus placei
HPLM_0001518701
I
maker-nMf.1.1.scaf05782-augustus-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf05782-augustus-gene-0.8
I
Minc12570
Meloidogyne incognita
Minc12570
I
NBR_0000131901
Nippostrongylus brasiliensis
NBR_0000131901
I
NECAME_14596
Necator americanus
NECAME_14596
I
scaffold142-EXSNAP2012.10
Pristionchus exspectatus
scaffold142-EXSNAP2012.10
I
TCNE_0000019201
Toxocara canis
TCNE_0000019201
I
che-1
Caenorhabditis elegans
WBGene00000483
D