CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_03674
(
Stagonospora nodorum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SNOG_03674
T326123_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.534
0.690
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_03674
Sox
126
183
PERPPSAYVIFSNQLSFTEIAKVVGERWQVLPTEERETCERQANTAKEKYYAELADYK
Links
Other
Sox
family TFs
Other
Stagonospora nodorum
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF544
Callithrix jacchus
ENSCJAG00000000329
I
ENSCSAG00000019664
Chlorocebus sabaeus
ENSCSAG00000019664
I
ZNF274
Dasypus novemcinctus
ENSDNOG00000032910
I
ZNF274
Equus caballus
ENSECAG00000007526
I
ZNF274
Erinaceus europaeus
ENSEEUG00000008228
I
ZNF274
Homo sapiens
ENSG00000171606
D
ZNF274
Gorilla gorilla
ENSGGOG00000004688
I
ZNF274
Microcebus murinus
ENSMICG00000017855
I
ZNF274
Macaca mulatta
ENSMMUG00000020505
I
ENSMPUG00000008378
Mustela putorius furo
ENSMPUG00000008378
I
ENSNLEG00000011103
Nomascus leucogenys
ENSNLEG00000011103
I
ZNF274
Otolemur garnettii
ENSOGAG00000005637
I
ZNF274
Ochotona princeps
ENSOPRG00000007383
I
ENSP00000409872
Macaca fascicularis
ENSP00000409872
I
ENSPANG00000012245
Papio anubis
ENSPANG00000012245
I
ENSPPYG00000010493
Pongo abelii
ENSPPYG00000010493
I
ZNF274
Pan troglodytes
ENSPTRG00000011583
I
ZNF274
Pteropus vampyrus
ENSPVAG00000002938
I
ZNF274
Sorex araneus
ENSSARG00000001423
I
ZNF274
Sus scrofa
ENSSSCG00000003998
I
ZNF274
Tupaia belangeri
ENSTBEG00000006394
I
ENSTSYG00000010913
Tarsius syrichta
ENSTSYG00000010913
I
ZNF274
Tursiops truncatus
ENSTTRG00000013077
I
Myotis_brandtii_ZNF274_10003422
Myotis brandtii
Myotis_brandtii_ZNF274_10003422
I