CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SNOG_13259
(
Stagonospora nodorum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SNOG_13259
T326130_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_13259
Sox
369
440
QQPASSPFLLYIGETGNDVKKALQQHGVKAGANEIAAECRRRWQTMSEEEKNKWNMLYADVVARYRDQITQS
Links
Other
Sox
family TFs
Other
Stagonospora nodorum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB05215.1
Alternaria brassicicola
AB05215.1
N
0.716
COCC4DRAFT_195579
Bipolaris maydis
COCC4DRAFT_195579
N
0.634
COCCADRAFT_104143
Bipolaris zeicola
COCCADRAFT_104143
N
0.634
COCMIDRAFT_9107
Bipolaris oryzae
COCMIDRAFT_9107
N
0.634
COCSADRAFT_171495
Bipolaris sorokiniana
COCSADRAFT_171495
N
0.634
COCVIDRAFT_103753
Bipolaris victoriae
COCVIDRAFT_103753
N
0.634
estExt_Genewise1Plus.C_90517
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_90517
N
0.634
LEMA_P110870.1
Leptosphaeria maculans
LEMA_P110870.1
N
0.687
MPH_11312
Macrophomina phaseolina
MPH_11312
N
0.496
PTRG_06745
Pyrenophora triticirepentis
PTRG_06745
N
0.622
PTT_12913
Pyrenophora teres
PTT_12913
N
0.622
SETTUDRAFT_149780
Setosphaeria turcica
SETTUDRAFT_149780
N
0.715
SNOG_13259
Phaeosphaeria nodorum
SNOG_13259
N
0.741
UCRNP2_9339
Neofusicoccum parvum
UCRNP2_9339
N
0.463