CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG16280
(
Caenorhabditis briggsae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CBG16280
T326868_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG16280
Sox
36
104
VKRPMNPFMIWCQKKRGEMLKSQKGTRPAEISKLLGEGWRLLSDVDKQPYVEEAERLKMDHERNSHVRR
CBG16280
Sox
110
178
VKRPMNPFMIWCRSKRGEMLKTQPGMKPSEISKQLGEGWRNMSDDEKRPFVDEAERLKMDHERNHPDYK
Links
Other
Sox
family TFs
Other
Caenorhabditis briggsae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Max
Drosophila melanogaster
FBgn0017578
D
0.000
GA21938
Drosophila pseudoobscura
FBgn0081923
I
0.000
GF10774
Drosophila ananassae
FBgn0087814
I
0.000
GG13417
Drosophila erecta
FBgn0105689
I
0.000
GH14421
Drosophila grimshawi
FBgn0121897
I
0.000
GI13548
Drosophila mojavensis
FBgn0136303
I
0.000
GL20913
Drosophila persimilis
FBgn0158508
I
0.000
GM14884
Drosophila sechellia
FBgn0169805
I
0.000
GD12293
Drosophila simulans
FBgn0184028
I
0.000
GJ11907
Drosophila virilis
FBgn0199160
I
0.000
GK19684
Drosophila willistoni
FBgn0221682
I
0.000
GE22514
Drosophila yakuba
FBgn0239734
I
0.000
GE22918
Drosophila yakuba
FBgn0240119
I
0.000
Hsal_16014--XP_623530.1_APIME
Harpegnathos saltator
Hsal_16014--XP_623530.1_APIME
I
0.000
LCUP011850
Lucilia cuprina
LCUP011850
I
0.000
MDOA012035
Musca domestica
MDOA012035
I
0.000
Ocbimv22020257m.g
Octopus bimaculoides
Ocbimv22020257m.g
I
0.000
Sakowv30027986m.g
Saccoglossus kowalevskii
Sakowv30027986m.g
I
0.000
TriadG51792
Trichoplax adhaerens
TriadG51792
I
0.000