CGI_10028818 (Crassostrea gigas)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CGI_10028818 T327030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.423 0.507
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC31179 Sox 185 253

Links

Other Sox family TFs
Other Crassostrea gigas TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB007753 Anopheles albimanus AALB007753 I
AARA011332 Anopheles arabiensis AARA011332 I
AEPI011470 Anopheles epiroticus AEPI011470 I
AFAF002111 Anopheles farauti AFAF002111 I
AQUA008686 Anopheles quadriannulatus AQUA008686 I
ASIS002518 Anopheles sinensis ASIS002518 I
BGIBMGA008907 Bombyx mori BGIBMGA008907 I
CPIJ016826 Culex quinquefasciatus CPIJ016826 I
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I
Runx1 Mus musculus ENSMUSG00000022952 D
Gfo_R015914 Geospiza fortis Gfo_R015914 I
HMEL009843 Heliconius melpomene HMEL009843 I
MCINX005906 Melitaea cinxia MCINX005906 I
MESCA007079 Megaselia scalaris MESCA007079 I
PPAI005889 Phlebotomus papatasi PPAI005889 I
RPRC000026 Rhodnius prolixus RPRC000026 I
SINV13345 Solenopsis invicta SINV13345 I