DICSQDRAFT_93113 (Dichomitus squalens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 DICSQDRAFT_93113 T327374_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.459 0.304
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJF56787 Sox 84 153

Links

Other Sox family TFs
Other Dichomitus squalens TFs

358 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27757.m000022 Ricinus communis 27757.m000022 I
29814.m000747 Ricinus communis 29814.m000747 I
AC219020.4_FG002 Zea mays AC219020.4_FG002 I
AMTR_s00021p00013790 Amborella trichopoda AMTR_s00021p00013790 I
Aquca_066_00001 Aquilegia coerulea Aquca_066_00001 I
BGIOSGA007863 Oryza indica BGIOSGA007863 I
BGIOSGA021086 Oryza indica BGIOSGA021086 I
Bo3g036170 Brassica oleracea Bo3g036170 I
Bo7g113230 Brassica oleracea Bo7g113230 I
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I
Bostr.25993s0515 Boechera stricta Bostr.25993s0515 I
Cagra.0202s0047 Capsella grandiflora Cagra.0202s0047 I
Carubv10024503m.g Capsella rubella Carubv10024503m.g I
cassava21831.m1 Manihot esculenta cassava21831.m1 I
cassava27240.m1 Manihot esculenta cassava27240.m1 I
cassava33845.m1 Manihot esculenta cassava33845.m1 I
cassava41268.m1 Manihot esculenta cassava41268.m1 I
Ca_06993 Cicer arietinum Ca_06993 I
Ca_08598 Cicer arietinum Ca_08598 I
CHLREDRAFT_196473 Chlamydomonas reinhardtii CHLREDRAFT_196473 I
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I
Ciclev10011992m.g Citrus clementina Ciclev10011992m.g I
Ciclev10017867m.g Citrus clementina Ciclev10017867m.g I
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I
Cla009858 Citrullus lanatus Cla009858 I
Cla013748 Citrullus lanatus Cla013748 I
Cla018361 Citrullus lanatus Cla018361 I
Cucsa.047000 Cucumis sativus Cucsa.047000 I
Cucsa.130050 Cucumis sativus Cucsa.130050 I
Cucsa.384780 Cucumis sativus Cucsa.384780 I
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I
Eucgr.A02031 Eucalyptus grandis Eucgr.A02031 I
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I
Eucgr.K02966 Eucalyptus grandis Eucgr.K02966 I
evm.TU.supercontig_120.33 Carica papaya evm.TU.supercontig_120.33 I
evm.TU.supercontig_19.148 Carica papaya evm.TU.supercontig_19.148 I
gene13487-v1.0-hybrid Fragaria vesca gene13487-v1.0-hybrid I
GLYMA02G45231 Glycine max GLYMA02G45231 I
GLYMA05G29161 Glycine max GLYMA05G29161 I
GLYMA08G12320 Glycine max GLYMA08G12320 I
GLYMA12G33911 Glycine max GLYMA12G33911 I
GLYMA13G36616 Glycine max GLYMA13G36616 I
GLYMA15G08970 Glycine max GLYMA15G08970 I
GLYMA18G43550 Glycine max GLYMA18G43550 I
GLYMA20G24290 Glycine max GLYMA20G24290 I
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I
Gorai.002G265400 Gossypium raimondii Gorai.002G265400 I
Gorai.004G233300 Gossypium raimondii Gorai.004G233300 I
Gorai.009G112300 Gossypium raimondii Gorai.009G112300 I
Gorai.009G161800 Gossypium raimondii Gorai.009G161800 I
Gorai.011G039000 Gossypium raimondii Gorai.011G039000 I
Gorai.011G291200 Gossypium raimondii Gorai.011G291200 I
Gorai.012G117800 Gossypium raimondii Gorai.012G117800 I
GRMZM2G069525 Zea mays GRMZM2G069525 I
GRMZM2G477238 Zea mays GRMZM2G477238 I
GSMUA_Achr10G14250_001 Musa acuminata GSMUA_Achr10G14250_001 I
GSMUA_Achr7G13880_001 Musa acuminata GSMUA_Achr7G13880_001 I
GSMUA_Achr7G22410_001 Musa acuminata GSMUA_Achr7G22410_001 I
LjSGA_025887.1 Lotus japonicus LjSGA_025887.1 N
LjSGA_106880.1 Lotus japonicus LjSGA_106880.1 I
LPERR02G08660 Leersia perrieri LPERR02G08660 I
LPERR06G14620 Leersia perrieri LPERR06G14620 I
Lus10002207.g Linum usitatissimum Lus10002207.g I
Lus10012239.g Linum usitatissimum Lus10012239.g I
Lus10029808.g Linum usitatissimum Lus10029808.g I
MDP0000244794 Malus domestica MDP0000244794 I
MLOC_56821 Hordeum vulgare MLOC_56821 I
MTR_2g084230 Medicago truncatula MTR_2g084230 I
OB02G19030 Oryza brachyantha OB02G19030 I
OB06G25370 Oryza brachyantha OB06G25370 I
OB12G10410 Oryza brachyantha OB12G10410 I
OBART02G10190 Oryza barthii OBART02G10190 I
OBART06G17710 Oryza barthii OBART06G17710 I
OGLUM02G02260 Oryza glumaepatula OGLUM02G02260 I
OGLUM06G18870 Oryza glumaepatula OGLUM06G18870 I
OLONG_024611 Oryza longistaminata OLONG_024611 I
ONIVA02G11280 Oryza nivara ONIVA02G11280 I
ONIVA06G21150 Oryza nivara ONIVA06G21150 I
OPUNC06G16010 Oryza punctata OPUNC06G16010 I
orange1.1g017464m.g Citrus sinensis orange1.1g017464m.g I
orange1.1g035517m.g Citrus sinensis orange1.1g035517m.g I
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I
ORGLA02G0091700 Oryza glaberrima ORGLA02G0091700 I
ORGLA06G0148100 Oryza glaberrima ORGLA06G0148100 I
ORUFI02G10190 Oryza rufipogon ORUFI02G10190 I
ORUFI06G18740 Oryza rufipogon ORUFI06G18740 I
OS02G0241200 Oryza sativa OS02G0241200 I
OS06G0543200 Oryza sativa OS06G0543200 I
Pavir.Aa02813 Panicum virgatum Pavir.Aa02813 I
Pavir.Ab01097 Panicum virgatum Pavir.Ab01097 I
Pavir.Da00896 Panicum virgatum Pavir.Da00896 I
Pavir.Db01175 Panicum virgatum Pavir.Db01175 I
PGSC0003DMG400004389 Solanum tuberosum PGSC0003DMG400004389 I
PGSC0003DMG400010194 Solanum tuberosum PGSC0003DMG400010194 I
PGSC0003DMG400030032 Solanum tuberosum PGSC0003DMG400030032 I
PK15677.1 Cannabis sativa PK15677.1 I
PK26523.1 Cannabis sativa PK26523.1 D
Pm013978 Prunus mume Pm013978 I
Pm014775 Prunus mume Pm014775 I
Pm018961 Prunus mume Pm018961 I
POPTR_0001s28690 Populus trichocarpa POPTR_0001s28690 I
POPTR_0002s05770 Populus trichocarpa POPTR_0002s05770 I
POPTR_0009s07890 Populus trichocarpa POPTR_0009s07890 I
POPTR_0010s19310 Populus trichocarpa POPTR_0010s19310 I
PRUPE_ppa025397mg Prunus persica PRUPE_ppa025397mg I
SapurV1A.0029s0520 Salix purpurea SapurV1A.0029s0520 I
SapurV1A.0042s0270 Salix purpurea SapurV1A.0042s0270 I
SapurV1A.0106s0010 Salix purpurea SapurV1A.0106s0010 I
SapurV1A.0354s0280 Salix purpurea SapurV1A.0354s0280 I
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I
SapurV1A.0566s0220 Salix purpurea SapurV1A.0566s0220 I
SapurV1A.0650s0140 Salix purpurea SapurV1A.0650s0140 I
SapurV1A.0905s0010 Salix purpurea SapurV1A.0905s0010 I
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I
Sb04g008670 Sorghum bicolor Sb04g008670 I
Sb10g021360 Sorghum bicolor Sb10g021360 I
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I
Si016955m.g Setaria italica Si016955m.g I
Solyc02g076670.2 Solanum lycopersicum Solyc02g076670.2 I
Solyc03g006150.2 Solanum lycopersicum Solyc03g006150.2 I
Solyc06g051060.2 Solanum lycopersicum Solyc06g051060.2 I
Solyc10g076460.1 Solanum lycopersicum Solyc10g076460.1 I
TCM_001726 Theobroma cacao TCM_001726 I
TCM_001942 Theobroma cacao TCM_001942 I
TCM_029684 Theobroma cacao TCM_029684 I
TCM_042189 Theobroma cacao TCM_042189 I
TCM_042463 Theobroma cacao TCM_042463 I
VIT_12s0028g02080 Vitis vinifera VIT_12s0028g02080 I