HMG20B (Callithrix jacchus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSCJAG00000003488 T327706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.673 0.870
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000006348 Sox 70 138
ENSCJAP00000006357 Sox 70 138

Links

Other Sox family TFs
Other Callithrix jacchus TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003374 Calypte anna Aan_R003374 N 0.000
Afo_R009641 Aptenodytes forsteri Afo_R009641 N 0.000
Brh_R002111 Buceros rhinoceros Brh_R002111 N 0.000
ZNF536 Anolis carolinensis ENSACAG00000012257 N 0.000
ENSAMEG00000009725 Ailuropoda melanoleuca ENSAMEG00000009725 N 0.000
ENSAMXG00000006281 Astyanax mexicanus ENSAMXG00000006281 N 0.000
ENSAPLG00000013219 Anas platyrhynchos ENSAPLG00000013219 N 0.000
ZNF536 Bos taurus ENSBTAG00000007262 N 0.000
ENSBTAP00000009552-D1 Bos grunniens ENSBTAP00000009552-D1 N 0.000
ZNF536 Canis familiaris ENSCAFG00000007601 N 0.000
ZNF536 Callithrix jacchus ENSCJAG00000018365 N 0.000
ZNF536 Cavia porcellus ENSCPOG00000008744 N 0.000
ENSCSAG00000004832 Chlorocebus sabaeus ENSCSAG00000004832 N 0.000
znf536 Danio rerio ENSDARG00000103648 N 0.000
ZNF536 Dasypus novemcinctus ENSDNOG00000008027 N 0.000
ZNF536 Equus caballus ENSECAG00000013732 N 0.000
ZNF536 Erinaceus europaeus ENSEEUG00000009769 N 0.000
ENSFALG00000000233 Ficedula albicollis ENSFALG00000000233 N 0.000
ZNF536 Felis catus ENSFCAG00000014303 N 0.000
ZNF536 Homo sapiens ENSG00000198597 N 0.000
znf536 Gasterosteus aculeatus ENSGACG00000014234 N 0.000
ENSGALG00000004510 Gallus gallus ENSGALG00000004510 N 0.000
ZNF536 Gorilla gorilla ENSGGOG00000013640 N 0.000
ENSGMOG00000000302 Gadus morhua ENSGMOG00000000302 N 0.000
ZNF536 Loxodonta africana ENSLAFG00000017731 N 0.000
ENSLOCG00000005719 Lepisosteus oculatus ENSLOCG00000005719 N 0.000
ENSMEUG00000009907 Macropus eugenii ENSMEUG00000009907 N 0.000
ZNF536 Meleagris gallopavo ENSMGAG00000005440 N 0.000
ENSMMUG00000008645 Macaca mulatta ENSMMUG00000008645 N 0.000
ZNF536 Monodelphis domestica ENSMODG00000012653 N 0.000
ENSMPUG00000007989 Mustela putorius furo ENSMPUG00000007989 N 0.000
Zfp536 Mus musculus ENSMUSG00000043456 N 0.000
ENSNLEG00000007605 Nomascus leucogenys ENSNLEG00000007605 N 0.000
ENSOARG00000004111 Ovis aries ENSOARG00000004111 N 0.000
ZNF536 Oryctolagus cuniculus ENSOCUG00000022631 N 0.000
ZNF536 Otolemur garnettii ENSOGAG00000003997 N 0.000
ENSONIG00000003511 Oreochromis niloticus ENSONIG00000003511 N 0.000
ZNF536 Ochotona princeps ENSOPRG00000009314 N 0.000
ENSP00000347730 Macaca fascicularis ENSP00000347730 N 0.000
ENSPANG00000016643 Papio anubis ENSPANG00000016643 N 0.000
ENSPFOG00000011945 Poecilia formosa ENSPFOG00000011945 N 0.000
ENSPPYG00000009811 Pongo abelii ENSPPYG00000009811 N 0.000
ENSPSIG00000007065 Pelodiscus sinensis ENSPSIG00000007065 N 0.000
ZNF536 Pan troglodytes ENSPTRG00000010786 N 0.000
Zfp536 Rattus norvegicus ENSRNOG00000014163 N 0.000
ENSSHAG00000013353 Sarcophilus harrisii ENSSHAG00000013353 N 0.000
ZNF536 Sus scrofa ENSSSCG00000029234 N 0.000
ZNF536 Tupaia belangeri ENSTBEG00000002295 N 0.000
ZNF536 Taeniopygia guttata ENSTGUG00000009013 N 0.000
znf536 Tetraodon nigroviridis ENSTNIG00000002948 N 0.000
znf536 Takifugu rubripes ENSTRUG00000005430 N 0.000
ZNF536 Tursiops truncatus ENSTTRG00000009847 N 0.000
ENSXMAG00000000995 Xiphophorus maculatus ENSXMAG00000000995 N 0.000
Gfo_R015099 Geospiza fortis Gfo_R015099 N 0.000
Pvit_19178 Pogona vitticeps Pvit_19178 N 0.000
znf536 Xenopus tropicalis XB-GENE-985016 N 0.000