CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_27042
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_27042
T330073_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA12532
Sox
69
135
PSKPSNAFFIYRKVYTRELIAQNLRFKMTDVSPWVSTSWNNEPEEVKAKYKEIAKEVRKIYKQTKLD
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_00926
Chaetomium globosum
CHGG_00926
N
0.000
e_gw1.18.1785.1
Nectria haematococca
e_gw1.18.1785.1
N
0.000
e_gw1.34.5.1
Cochliobolus heterostrophus C5
e_gw1.34.5.1
N
0.000
FGRRES_05716_M
Fusarium graminearum
FGRRES_05716_M
N
0.000
GGTG_03384
Gaeumannomyces graminis
GGTG_03384
N
0.000
PITC_016440
Penicillium italicum
PITC_016440
N
0.000
S40285_09207
Stachybotrys chlorohalonata
S40285_09207
N
0.000
SAPIO_CDS3191
Scedosporium apiospermum
SAPIO_CDS3191
N
0.000
Z518_08215
Rhinocladiella mackenziei
Z518_08215
N
0.000
Z518_09246
Rhinocladiella mackenziei
Z518_09246
N
0.000