CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_30035
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_30035
T330080_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA09877
Sox
37
104
KSRAPNRYLIYRLAFLKELRKRTDDNVSMTKISSHISSMWFNETTAIRDAYKNLSEQVENRLTEIRQK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRK_0000146000
Parastrongyloides trichosuri
PTRK_0000146000
N
0.000
PTRK_0000295600
Parastrongyloides trichosuri
PTRK_0000295600
N
0.000
PTRK_0000968500
Parastrongyloides trichosuri
PTRK_0000968500
N
0.000
RSKR_0000113200
Rhabditophanes kr3021
RSKR_0000113200
N
0.000
RSKR_0001028000
Rhabditophanes kr3021
RSKR_0001028000
N
0.000
SPAL_0000268400
Strongyloides papillosus
SPAL_0000268400
N
0.000
SPAL_0001405500
Strongyloides papillosus
SPAL_0001405500
N
0.000
SSTP_0000600400
Strongyloides stercoralis
SSTP_0000600400
N
0.000
SSTP_0000764200
Strongyloides stercoralis
SSTP_0000764200
N
0.000
SVE_1898000
Strongyloides venezuelensis
SVE_1898000
N
0.000