CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_62801
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_62801
T330195_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA04898
Sox
1
66
PQNAFILYRRDKAKKHKNEHKGLRSCDISKKIAKMWSEETPEVKVLFEALSRLSEKAHNKKYGNYK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf184908.g134
Trametes cinnabarina
BN946_scf184908.g134
I
0.429
BN946_scf184940.g27
Trametes cinnabarina
BN946_scf184940.g27
I
0.427
CY34DRAFT_797588
Suillus luteus
CY34DRAFT_797588
I
0.420
DICSQDRAFT_67430
Dichomitus squalens
DICSQDRAFT_67430
I
0.421
e_gw1.16.345.1
Neurospora discreta
e_gw1.16.345.1
I
0.432
fgeneshPB_pg.1__1053
Phycomyces blakesleeanus
fgeneshPB_pg.1__1053
I
0.427
GLOINDRAFT_12270
Rhizophagus irregularis
GLOINDRAFT_12270
I
0.431
GLOINDRAFT_349274
Rhizophagus irregularis
GLOINDRAFT_349274
N
0.415
GLOINDRAFT_75094
Rhizophagus irregularis
GLOINDRAFT_75094
I
0.431
GLOINDRAFT_76577
Rhizophagus irregularis
GLOINDRAFT_76577
N
0.443
M404DRAFT_69579
Pisolithus tinctorius
M404DRAFT_69579
I
0.443
NCU03481
Neurospora crassa
NCU03481
I
0.416
NEUTE1DRAFT_123419
Neurospora tetrasperma
NEUTE1DRAFT_123419
I
0.416
PISMIDRAFT_39129
Pisolithus microcarpus
PISMIDRAFT_39129
I
0.443
SERLA73DRAFT_71121
Serpula lacrymans
SERLA73DRAFT_71121
I
0.479
W97_07151
Coniosporium apollinis
W97_07151
N
0.430