GLYMA01G33370 (Glycine max)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLYMA01G33370 T330260_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.712 0.977
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.689 0.727
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.689 0.727
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.678 0.909
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.678 0.909
INO
M02485_2.00 		Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN		 PBM
Weirauch et al.(2014)
pTH7516 		0.567 0.727
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G33370.1 Sox 131 174

Links

Other Sox family TFs
Other Glycine max TFs

529 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP15315 Atta cephalotes ACEP15315 N 0.000
ADIR004612 Anopheles dirus ADIR004612 N 0.000
AEPI000661 Anopheles epiroticus AEPI000661 N 0.000
ASIS006297 Anopheles sinensis ASIS006297 N 0.000
CRE03357 Caenorhabditis remanei CRE03357 N 0.000
ECPE_0000273401 Echinostoma caproni ECPE_0000273401 N 0.000
ENSPCAG00000014663 Procavia capensis ENSPCAG00000014663 N 0.000
GK18638 Drosophila willistoni FBgn0220636 N 0.000
MDOA004921 Musca domestica MDOA004921 N 0.000
nOo.2.0.1.g06577 Onchocerca ochengi nOo.2.0.1.g06577 N 0.000
PEQ_0000587201 Parascaris equorum PEQ_0000587201 N 0.000
PXEA_0001865101 Protopolystoma xenopodis PXEA_0001865101 N 0.000
PXEA_0002437401 Protopolystoma xenopodis PXEA_0002437401 N 0.000
SMU15026520 Schmidtea mediterranea SMU15026520 N 0.000
SPER_0000032601 Spirometra erinaceieuropaei SPER_0000032601 N 0.000
SSLN_0001114201 Schistocephalus solidus SSLN_0001114201 N 0.000
pax6.L Xenopus laevis XB-GENE-865046 I 0.000