GLYMA13G05140 (Glycine max)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLYMA13G05140 T330289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.429 0.537
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.429 0.537
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.422 0.507
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.422 0.507
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G05140.2 Sox 466 532

Links

Other Sox family TFs
Other Glycine max TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011359 Aedes aegypti AAEL011359 N 0.000
AALB003318 Anopheles albimanus AALB003318 N 0.000
AARA010518 Anopheles arabiensis AARA010518 N 0.000
ACEP10864 Atta cephalotes ACEP10864 N 0.000
ACOM037786 Anopheles coluzzii ACOM037786 N 0.000
ACUA009064 Anopheles culicifacies ACUA009064 N 0.000
ACUA021284 Anopheles culicifacies ACUA021284 N 0.000
ADAC003441 Anopheles darlingi ADAC003441 N 0.000
ADIR001048 Anopheles dirus ADIR001048 N 0.000
AEPI002999 Anopheles epiroticus AEPI002999 N 0.000
AFAF003258 Anopheles farauti AFAF003258 N 0.000
AFUN002858 Anopheles funestus AFUN002858 N 0.000
AGAP013287 Anopheles gambiae AGAP013287 N 0.000
AMEC007532 Anopheles melas AMEC007532 N 0.000
AMEM000708 Anopheles merus AMEM000708 N 0.000
AMIN005282 Anopheles minimus AMIN005282 N 0.000
AQUA008196 Anopheles quadriannulatus AQUA008196 N 0.000
ASIS002506 Anopheles sinensis ASIS002506 N 0.000
ASTEI10578 Anopheles stephensi ASTEI10578 N 0.000
Cflo_11381--XP_391906.3_APIME Camponotus floridanus Cflo_11381--XP_391906.3_APIME N 0.000
CPIJ019088 Culex quinquefasciatus CPIJ019088 N 0.000
CpipJ_CPIJ019088 Culex pipiens CpipJ_CPIJ019088 N 0.000
NFAT Drosophila melanogaster FBgn0030505 N 0.000
GA10815 Drosophila pseudoobscura FBgn0070871 N 0.000
GF21808 Drosophila ananassae FBgn0098808 N 0.000
GG17798 Drosophila erecta FBgn0110020 N 0.000
GI15077 Drosophila mojavensis FBgn0137827 N 0.000
GL22604 Drosophila persimilis FBgn0160195 N 0.000
GM17623 Drosophila sechellia FBgn0172531 N 0.000
GJ18884 Drosophila virilis FBgn0206030 N 0.000
GK24938 Drosophila willistoni FBgn0226897 N 0.000
GE17094 Drosophila yakuba FBgn0234577 N 0.000
GB45138 Apis mellifera GB45138 N 0.000
HHAL007230-PA Halyomorpha halys HHAL007230-PA N 0.000
Hsal_04301--XP_391906.3_APIME Harpegnathos saltator Hsal_04301--XP_391906.3_APIME N 0.000
KGM_16908 Danaus plexippus KGM_16908 N 0.000
L798_07911 Zootermopsis nevadensis L798_07911 N 0.000
LDEC006285 Leptinotarsa decemlineata LDEC006285 N 0.000
MDOA013115 Musca domestica MDOA013115 N 0.000
NV18092 Nasonia vitripennis NV18092 N 0.000
PHUM363570 Pediculus humanus PHUM363570 N 0.000
SINV15756 Solenopsis invicta SINV15756 N 0.000
TC014708 Tribolium castaneum TC014708 N 0.000