CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0A04840
(
Kazachstania naganishii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
KNAG_0A04840
T330803_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMO1
M11344_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$_HMO1_01
0.669
0.884
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK68154
Sox
104
177
PKKPLTVFFAYSAYVRQELRDARQKAGLAPLSSTEITQEISKKWKELSDAEKEKWKQAYHVELEHYQKAKQEYL
Links
Other
Sox
family TFs
Other
Kazachstania naganishii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA011328
Anopheles arabiensis
AARA011328
N
Hsal_18579--BGIBMGA009481-PA_BOMMO
Harpegnathos saltator
Hsal_18579--BGIBMGA009481-PA_BOMMO
N
LDEC014124
Leptinotarsa decemlineata
LDEC014124
N
NBR_0000370001
Nippostrongylus brasiliensis
NBR_0000370001
N
Ocbimv22011147m.g
Octopus bimaculoides
Ocbimv22011147m.g
N
OESDEN_23534
Oesophagostomum dentatum
OESDEN_23534
N
Pm017633
Prunus mume
Pm017633
N
PRUPE_ppa010478m2g
Prunus persica
PRUPE_ppa010478m2g
N
RPRC012973
Rhodnius prolixus
RPRC012973
N
TELCIR_07160
Teladorsagia circumcincta
TELCIR_07160
N
TELCIR_23557
Teladorsagia circumcincta
TELCIR_23557
N