CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LALA0_S03e03444g
(
Lachancea lanzarotensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
LALA0_S03e03444g
T330886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMO1
M11344_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$_HMO1_01
0.706
0.913
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEP61464
Sox
109
182
PKKPLTVFFAYSAYVRQALREDRQKAGLPPLSSTEITQEISKKWKELSDSEKFKWKQAYNAELENYQQEKLKYL
Links
Other
Sox
family TFs
Other
Lachancea lanzarotensis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB55498
Apis mellifera
GB55498
N
Hsal_07926--XP_394278.2_APIME
Harpegnathos saltator
Hsal_07926--XP_394278.2_APIME
N
L798_13304
Zootermopsis nevadensis
L798_13304
N
LCUP006074
Lucilia cuprina
LCUP006074
I
LDEC004697
Leptinotarsa decemlineata
LDEC004697
N
MDOA011188
Musca domestica
MDOA011188
I
TC014225
Tribolium castaneum
TC014225
N