OPUNC08G00150 (Oryza punctata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OPUNC08G00150 T331666_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.422 0.552
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC08G00150.1 Sox 736 803

Links

Other Sox family TFs
Other Oryza punctata TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF317 Callithrix jacchus ENSCJAG00000006214 I
ENSCPOG00000003954 Cavia porcellus ENSCPOG00000003954 I
ENSCSAG00000007764 Chlorocebus sabaeus ENSCSAG00000007764 I
Zfp317 Dipodomys ordii ENSDORG00000011612 I
ZNF317 Homo sapiens ENSG00000130803 D
ZNF317 Myotis lucifugus ENSMLUG00000012039 I
ZNF317 Macaca mulatta ENSMMUG00000020841 I
ENSNLEG00000011962 Nomascus leucogenys ENSNLEG00000011962 I
ENSOCUG00000007715 Oryctolagus cuniculus ENSOCUG00000007715 I
ZNF317 Otolemur garnettii ENSOGAG00000011129 I
ZNF317 Ochotona princeps ENSOPRG00000014061 I
ENSP00000247956 Macaca fascicularis ENSP00000247956 I
ENSPANG00000007764 Papio anubis ENSPANG00000007764 I
ENSPPYG00000009520 Pongo abelii ENSPPYG00000009520 I
ZNF317 Pan troglodytes ENSPTRG00000042436 I
Zfp317 Rattus norvegicus ENSRNOG00000006684 N
ENSSSCG00000022610 Sus scrofa ENSSSCG00000022610 I
ENSSTOG00000021569 Ictidomys tridecemlineatus ENSSTOG00000021569 I
Myotis_brandtii_ZNF317_10002973 Myotis brandtii Myotis_brandtii_ZNF317_10002973 I