CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PLEOSDRAFT_27233
(
Pleurotus ostreatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PLEOSDRAFT_27233
T332082_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDQ29529
Sox
319
388
PKLAPSAWQLYFTDWIQRQQASNTRKLNVAQAAKEAGQEYASLTPEEKEPYKRKSQAMKDARERDLAAYM
KDQ29529
Sox
423
495
PKKPLSAYFMFLQRIRANPSLVHDIFGDETETTKQSVLAAAKWRSMSDEERKPFLAQAEQEKMEYEAARRLYE
Links
Other
Sox
family TFs
Other
Pleurotus ostreatus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_139119
Bipolaris maydis
COCC4DRAFT_139119
N
COCCADRAFT_88301
Bipolaris zeicola
COCCADRAFT_88301
N
COCMIDRAFT_88243
Bipolaris oryzae
COCMIDRAFT_88243
N
COCSADRAFT_144149
Bipolaris sorokiniana
COCSADRAFT_144149
N
estExt_fgenesh1_pg.C_10092
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_10092
N
SETTUDRAFT_139624
Setosphaeria turcica
SETTUDRAFT_139624
N