CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_045441
(
Theobroma cacao
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
TCM_045441
T332838_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY20043
Sox
70
132
PWQPRSAFSIFMESFMIDNNNGNFIDIDRRGFETWKNMCKEERQPYVAQAEKVNSAYTKNVIE
Links
Other
Sox
family TFs
Other
Theobroma cacao
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab01431
Panicum virgatum
Pavir.Ab01431
N
0.000
Pavir.Ca01963
Panicum virgatum
Pavir.Ca01963
N
0.000
Pavir.Ea02077
Panicum virgatum
Pavir.Ea02077
N
0.000
Pavir.Gb02380
Panicum virgatum
Pavir.Gb02380
N
0.000