CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tetur23g01950
(
Tetranychus urticae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
tetur23g01950
T332884_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.709
0.652
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.539
0.638
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.539
0.638
Bbx
M00196_2.00
Mus musculus
TTCATTGA
TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.506
0.623
gei-3
M00711_2.00
Caenorhabditis elegans
NWNWMWDN
NHWKWNWN
PBM
Narasimhan et al.(2015)
pTH10038
0.476
0.536
Cic
M00195_2.00
Mus musculus
NNTGCTGABN
NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.450
0.551
cic
M06452_2.00
Drosophila melanogaster
YYCATTSA
TSAATGRR
B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386
0.417
0.536
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
tetur23g01950.1
Sox
100
168
QKRPMNAFLIFCKRHRSVVKQKYPHLENRRITKILGEWWAALDGEAKRKYTELARSYKEAFMKANPHFK
Links
Other
Sox
family TFs
Other
Tetranychus urticae
TFs
281 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_08731
Capronia coronata
A1O1_08731
I
0.000
A1O3_08120
Capronia epimyces
A1O3_08120
I
0.000
A1O5_04644
Cladophialophora psammophila
A1O5_04644
I
0.000
A1O7_03252
Cladophialophora yegresii
A1O7_03252
I
0.000
A1O9_02495
Exophiala aquamarina
A1O9_02495
I
0.000
AB03633.1
Alternaria brassicicola
AB03633.1
I
0.000
ACRE_015620
Acremonium chrysogenum
ACRE_015620
I
0.000
AOL_s00086g1
Arthrobotrys oligospora
AOL_s00086g1
I
0.000
ARB_03466
Arthroderma benhamiae
ARB_03466
I
0.000
AUEXF2481DRAFT_64995
Aureobasidium subglaciale
AUEXF2481DRAFT_64995
I
0.000
BAUCODRAFT_47223
Baudoinia compniacensis
BAUCODRAFT_47223
I
0.000
Bcin03g02160
Botrytis cinerea
Bcin03g02160
I
0.000
BDDG_07949
Blastomyces dermatitidis
BDDG_07949
I
0.000
BGHDH14_bgh00681
Blumeria graminis
BGHDH14_bgh00681
I
0.000
BGHDH14_bgh05670
Blumeria graminis
BGHDH14_bgh05670
I
0.000
ACLA_092100
Aspergillus clavatus
CADACLAG00008293
I
0.000
CADAFLAG00007216
Aspergillus flavus
CADAFLAG00007216
I
0.000
CADANGAG00005978
Aspergillus niger
CADANGAG00005978
I
0.000
ANIA_04558
Aspergillus nidulans
CADANIAG00005880
D
0.000
CADAORAG00008631
Aspergillus oryzae
CADAORAG00008631
I
0.000
ATEG_06908
Aspergillus terreus
CADATEAG00001478
I
0.000
CFIO01_13087
Colletotrichum fioriniae
CFIO01_13087
I
0.000
CGGC5_6589
Colletotrichum gloeosporioides
CGGC5_6589
I
0.000
CH063_05908
Colletotrichum higginsianum
CH063_05908
I
0.000
CHGG_02417
Chaetomium globosum
CHGG_02417
I
0.000
CIMG_01795
Coccidioides immitis
CIMG_01795
I
0.000
CMQ_5874
Grosmannia clavigera
CMQ_5874
I
0.000
Cob_03112
Colletotrichum orbiculare
Cob_03112
I
0.000
COCC4DRAFT_207933
Bipolaris maydis
COCC4DRAFT_207933
I
0.000
COCCADRAFT_94387
Bipolaris zeicola
COCCADRAFT_94387
I
0.000
COCMIDRAFT_8258
Bipolaris oryzae
COCMIDRAFT_8258
I
0.000
COCSADRAFT_150882
Bipolaris sorokiniana
COCSADRAFT_150882
I
0.000
COCVIDRAFT_29056
Bipolaris victoriae
COCVIDRAFT_29056
I
0.000
CPC735_046980
Coccidioides posadasii
CPC735_046980
I
0.000
CPUR_01168
Claviceps purpurea
CPUR_01168
I
0.000
CSUB01_00170
Colletotrichum sublineola
CSUB01_00170
I
0.000
DACRYDRAFT_114226
Dacryopinax sp
DACRYDRAFT_114226
I
0.000
DICSQDRAFT_139215
Dichomitus squalens
DICSQDRAFT_139215
I
0.000
DOTSEDRAFT_67811
Dothistroma septosporum
DOTSEDRAFT_67811
I
0.000
DRE_01419
Drechslerella stenobrocha
DRE_01419
I
0.000
EPUS_08235
Endocarpon pusillum
EPUS_08235
I
0.000
estExt_fgenesh3_pm.C_10763
Neurospora discreta
estExt_fgenesh3_pm.C_10763
I
0.000
estExt_Genewise1.C_350071
Cochliobolus heterostrophus C5
estExt_Genewise1.C_350071
I
0.000
estExt_Genewise1Plus.C_12162
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_12162
I
0.000
estExt_Genewise1Plus.C_12924
Cryphonectria parasitica
estExt_Genewise1Plus.C_12924
I
0.000
EURHEDRAFT_449663
Aspergillus ruber
EURHEDRAFT_449663
I
0.000
e_gw1.5.103.1
Tremella mesenterica
e_gw1.5.103.1
N
0.000
F503_00197
Ophiostoma piceae uamh
F503_00197
I
0.000
FFUJ_03061
Fusarium fujikuroi
FFUJ_03061
I
0.000
fgenesh1_pg.00009_#_206
Aspergillus carbonarius
fgenesh1_pg.00009_#_206
I
0.000
fgenesh1_pm.sca_6_chr9_2_0000181
Nectria haematococca
fgenesh1_pm.sca_6_chr9_2_0000181
I
0.000
fgeneshMC_pg.2_#_284
Mucor circinelloides
fgeneshMC_pg.2_#_284
I
0.000
FGRRES_06810
Fusarium graminearum
FGRRES_06810
I
0.000
FOMPIDRAFT_1057254
Fomitopsis pinicola
FOMPIDRAFT_1057254
I
0.000
FOXG_02014
Fusarium oxysporum
FOXG_02014
I
0.000
FPSE_11855
Fusarium pseudograminearum
FPSE_11855
I
0.000
FVEG_05176
Fusarium verticillioides
FVEG_05176
I
0.000
G647_05131
Cladophialophora carrionii
G647_05131
I
0.000
GALMADRAFT_256803
Galerina marginata
GALMADRAFT_256803
I
0.000
GGTG_02610
Gaeumannomyces graminis
GGTG_02610
I
0.000
GLRG_03129
Colletotrichum graminicola
GLRG_03129
I
0.000
GMDG_00261
Pseudogymnoascus destructans
GMDG_00261
I
0.000
GSTUM_00005693001
Tuber melanosporum
GSTUM_00005693001
I
0.000
gw1.4.55.1
Mycosphaerella graminicola
gw1.4.55.1
I
0.000
H072_1723
Dactylellina haptotyla
H072_1723
I
0.000
H101_03088
Trichophyton interdigitale
H101_03088
I
0.000
H102_08460
Trichophyton rubrum
H102_08460
I
0.000
H105_08489
Trichophyton soudanense
H105_08489
I
0.000
HCBG_02620
Histoplasma capsulatum
HCBG_02620
I
0.000
HETIRDRAFT_477710
Heterobasidion irregulare
HETIRDRAFT_477710
I
0.000
HMPREF1624_04530
Sporothrix schenckii
HMPREF1624_04530
I
0.000
JAAARDRAFT_195593
Jaapia argillacea
JAAARDRAFT_195593
I
0.000
K437DRAFT_34553
Tilletiaria anomala
K437DRAFT_34553
I
0.000
LEMA_P017080.1
Leptosphaeria maculans
LEMA_P017080.1
I
0.000
M404DRAFT_1005658
Pisolithus tinctorius
M404DRAFT_1005658
I
0.000
M407DRAFT_16868
Tulasnella calospora
M407DRAFT_16868
I
0.000
M413DRAFT_167868
Hebeloma cylindrosporum
M413DRAFT_167868
I
0.000
M413DRAFT_446153
Hebeloma cylindrosporum
M413DRAFT_446153
I
0.000
M413DRAFT_446160
Hebeloma cylindrosporum
M413DRAFT_446160
I
0.000
M437DRAFT_53287
Aureobasidium melanogenum
M437DRAFT_53287
I
0.000
M438DRAFT_335244
Aureobasidium pullulans
M438DRAFT_335244
I
0.000
MAJ_04832
Metarhizium majus
MAJ_04832
I
0.000
MAM_00511
Metarhizium album
MAM_00511
I
0.000
MAPG_09052
Magnaporthe poae
MAPG_09052
I
0.000
MBM_08201
Marssonina brunnea
MBM_08201
I
0.000
MCYG_03330
Microsporum canis
MCYG_03330
I
0.000
MCYG_03330
Arthroderma otae
MCYG_03330
I
0.000
MGG_07450
Magnaporthe oryzae
MGG_07450
I
0.000
MGU_08463
Metarhizium guizhouense
MGU_08463
I
0.000
MGYG_00493
Microsporum gypseum
MGYG_00493
I
0.000
Moror_2492
Moniliophthora roreri
Moror_2492
I
0.000
Moror_3407
Moniliophthora roreri
Moror_3407
I
0.000
MPH_05411
Macrophomina phaseolina
MPH_05411
I
0.000
MYCFIDRAFT_149027
Pseudocercospora fijiensis
MYCFIDRAFT_149027
I
0.000
Mycgr3G10667
Zymoseptoria tritici
Mycgr3G10667
I
0.000
MYCTH_2301134
Myceliophthora thermophila
MYCTH_2301134
I
0.000
NCU01478
Neurospora crassa
NCU01478
D
0.000
NechaG96223
Fusarium solani
NechaG96223
I
0.000
NEUTE1DRAFT_56998
Neurospora tetrasperma
NEUTE1DRAFT_56998
I
0.000
OCS_03300
Ophiocordyceps sinensis
OCS_03300
I
0.000
OIDMADRAFT_111796
Oidiodendron maius
OIDMADRAFT_111796
I
0.000
PAAG_05105
Paracoccidioides sp lutzii
PAAG_05105
I
0.000
PABG_04552
Paracoccidioides brasiliensis
PABG_04552
I
0.000
PaG_01650
Pseudozyma aphidis
PaG_01650
I
0.000
PAXINDRAFT_31743
Paxillus involutus
PAXINDRAFT_31743
I
0.000
Pc18g05390
Penicillium chrysogenum
Pc18g05390
I
0.000
PCH_Pc18g05390
Penicillium rubens
PCH_Pc18g05390
I
0.000
PDE_05378
Penicillium oxalicum
PDE_05378
I
0.000
PDIP_71050
Penicillium digitatum
PDIP_71050
I
0.000
PEX1_071460
Penicillium expansum
PEX1_071460
I
0.000
PFICI_10867
Pestalotiopsis fici
PFICI_10867
I
0.000
PGUG_03208
Candida guilliermondii
PGUG_03208
I
0.000
PGUG_03208
Meyerozyma guilliermondii
PGUG_03208
I
0.000
PHLGIDRAFT_115686
Phlebiopsis gigantea
PHLGIDRAFT_115686
I
0.000
PHLGIDRAFT_60579
Phlebiopsis gigantea
PHLGIDRAFT_60579
I
0.000
PHSY_004266
Pseudozyma hubeiensis
PHSY_004266
I
0.000
PITC_092550
Penicillium italicum
PITC_092550
I
0.000
PMAA_044700
Talaromyces marneffei
PMAA_044700
I
0.000
PMAA_044700
Penicillium marneffei
PMAA_044700
I
0.000
PSEUBRA_SCAF1g00170
Pseudozyma brasiliensis
PSEUBRA_SCAF1g00170
I
0.000
PTRG_00141
Pyrenophora triticirepentis
PTRG_00141
I
0.000
PTT_18497
Pyrenophora teres
PTT_18497
I
0.000
PV04_03432
Capronia semiimmersa
PV04_03432
I
0.000
PV05_05939
Exophiala xenobiotica
PV05_05939
I
0.000
PV06_00465
Exophiala oligosperma
PV06_00465
I
0.000
PV07_06914
Cladophialophora immunda
PV07_06914
I
0.000
PV08_04344
Exophiala spinifera
PV08_04344
I
0.000
PV09_02833
Verruconis gallopava
PV09_02833
I
0.000
PV10_05946
Exophiala mesophila
PV10_05946
I
0.000
PV11_01019
Exophiala sideris
PV11_01019
I
0.000
PVAR5_8495
Byssochlamys spectabilis
PVAR5_8495
I
0.000
S40285_01567
Stachybotrys chlorohalonata
S40285_01567
I
0.000
S40288_02961
Stachybotrys chartarum
S40288_02961
I
0.000
SAPIO_CDS9713
Scedosporium apiospermum
SAPIO_CDS9713
I
0.000
SBOR_6586
Sclerotinia borealis
SBOR_6586
I
0.000
SCHCODRAFT_108853
Schizophyllum commune
SCHCODRAFT_108853
I
0.000
SEPMUDRAFT_146834
Sphaerulina musiva
SEPMUDRAFT_146834
I
0.000
SERLA73DRAFT_65877
Serpula lacrymans
SERLA73DRAFT_65877
I
0.000
SETTUDRAFT_166989
Setosphaeria turcica
SETTUDRAFT_166989
I
0.000
SMAC_07049
Sordaria macrospora
SMAC_07049
I
0.000
SNOG_14661
Stagonospora nodorum
SNOG_14661
I
0.000
SNOG_14662
Phaeosphaeria nodorum
SNOG_14662
I
0.000
prt1
Schizosaccharomyces pombe
SPBC530.05
I
0.000
SPBR_05546
Sporothrix brasiliensis
SPBR_05546
I
0.000
sr11453
Sporisorium reilianum
sr11453
I
0.000
TEQG_00844
Trichophyton equinum
TEQG_00844
I
0.000
TESG_08566
Trichophyton tonsurans
TESG_08566
I
0.000
THITE_57956
Thielavia terrestris
THITE_57956
I
0.000
TRIATDRAFT_295508
Trichoderma atroviride
TRIATDRAFT_295508
I
0.000
TRIREDRAFT_2148
Trichoderma reesei
TRIREDRAFT_2148
I
0.000
TRIVIDRAFT_33603
Trichoderma virens
TRIVIDRAFT_33603
I
0.000
TRV_06120
Trichophyton verrucosum
TRV_06120
I
0.000
TSTA_033840
Talaromyces stipitatus
TSTA_033840
I
0.000
U727_00431305611
Penicillium solitum
U727_00431305611
I
0.000
UCRNP2_488
Neofusicoccum parvum
UCRNP2_488
I
0.000
UCRPA7_6910
Togninia minima
UCRPA7_6910
I
0.000
UHOR_00180
Ustilago hordei
UHOR_00180
I
0.000
UM00113
Ustilago maydis
UM00113
I
0.000
UREG_05491
Uncinocarpus reesii
UREG_05491
I
0.000
V565_126390
Rhizoctonia solani
V565_126390
I
0.000
VDAG_08521
Verticillium dahliae
VDAG_08521
I
0.000
VDBG_00235
Verticillium albo atrum
VDBG_00235
I
0.000
VDBG_00235
Verticillium alfalfae
VDBG_00235
I
0.000
VHEMI01078
Torrubiella hemipterigena
VHEMI01078
I
0.000
W97_02786
Coniosporium apollinis
W97_02786
I
0.000
X797_009540
Metarhizium robertsii
X797_009540
I
0.000
Z517_10598
Fonsecaea pedrosoi
Z517_10598
I
0.000
Z518_01229
Rhinocladiella mackenziei
Z518_01229
I
0.000
Z519_02471
Cladophialophora bantiana
Z519_02471
I
0.000