CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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swsn-3
(
Caenorhabditis elegans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
WBGene00022182
T333280_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y71H2AM.17
Sox
26
94
PERPLQPYMRYSRKMWPKVRAENPEAQLWDIGKMIGKYWLDLPDGEKSHYQHEYELEKADYEKQMKHFQ
Links
Other
Sox
family TFs
Other
Caenorhabditis elegans
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA006778
Anopheles arabiensis
AARA006778
N
0.000
ACEP24927
Atta cephalotes
ACEP24927
N
0.000
ACOM042119
Anopheles coluzzii
ACOM042119
N
0.000
ADIR009007
Anopheles dirus
ADIR009007
N
0.000
AEPI002762
Anopheles epiroticus
AEPI002762
N
0.000
AGAP002164
Anopheles gambiae
AGAP002164
N
0.000
AMIN003104
Anopheles minimus
AMIN003104
N
0.000
AQUA008619
Anopheles quadriannulatus
AQUA008619
N
0.000
Cflo_02155--NP_001035356.1_APIME
Camponotus floridanus
Cflo_02155--NP_001035356.1_APIME
N
0.000
CPIJ003270
Culex quinquefasciatus
CPIJ003270
N
0.000
CpipJ_CPIJ003270
Culex pipiens
CpipJ_CPIJ003270
N
0.000
br
Drosophila melanogaster
FBgn0000210
D
0.000
GG12869
Drosophila erecta
FBgn0105144
N
0.000
GI16492
Drosophila mojavensis
FBgn0139240
N
0.000
GD24719
Drosophila simulans
FBgn0196042
N
0.000
GE16699
Drosophila yakuba
FBgn0234196
N
0.000
HHAL005051-PA
Halyomorpha halys
HHAL005051-PA
N
0.000
Hsal_01160--NP_001035356.1_APIME
Harpegnathos saltator
Hsal_01160--NP_001035356.1_APIME
N
0.000
L798_01786
Zootermopsis nevadensis
L798_01786
N
0.000
MDOA006186
Musca domestica
MDOA006186
N
0.000
PHUM258420
Pediculus humanus
PHUM258420
N
0.000
RPRC003967
Rhodnius prolixus
RPRC003967
N
0.000
TC005475
Tribolium castaneum
TC005475
N
0.000