CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.9_#_75
(
Fragilariopsis cylindrus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
fgenesh2_pg.9_#_75
T334136_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.9_#_75
Sox
34
65
PKRPLSAYNYFFKEEREKIVKVVLAEDPSAVK
fgenesh2_pg.9_#_75
Sox
76
132
AETIGRLKKEGGKVSFEEMGKIIGQRWKNIDPDRLAKYAELAAVDTERYKTEMQKYN
Links
Other
Sox
family TFs
Other
Fragilariopsis cylindrus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001256201
Anisakis simplex
ASIM_0001256201
I
0.000