fgenesh2_pg.scaffold_67000042 (Branchiostoma floridae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.scaffold_67000042 T334167_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_67000042 Sox 263 321

Links

Other Sox family TFs
Other Branchiostoma floridae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_150877 Agaricus bisporus AGABI2DRAFT_150877 N 0.000
BOTBODRAFT_99872 Botryobasidium botryosum BOTBODRAFT_99872 N 0.000
CC1G_09335 Coprinopsis cinerea CC1G_09335 N 0.000
CERSUDRAFT_119121 Ceriporiopsis subvermispora CERSUDRAFT_119121 N 0.000
CY34DRAFT_468895 Suillus luteus CY34DRAFT_468895 N 0.000
DACRYDRAFT_114563 Dacryopinax sp DACRYDRAFT_114563 N 0.000
estExt_fgenesh2_pm.C_30290 Heterobasidion annosum estExt_fgenesh2_pm.C_30290 N 0.000
FOMPIDRAFT_1034579 Fomitopsis pinicola FOMPIDRAFT_1034579 N 0.000
GALMADRAFT_97916 Galerina marginata GALMADRAFT_97916 N 0.000
GLOTRDRAFT_120398 Gloeophyllum trabeum GLOTRDRAFT_120398 N 0.000
HETIRDRAFT_476261 Heterobasidion irregulare HETIRDRAFT_476261 N 0.000
JAAARDRAFT_35324 Jaapia argillacea JAAARDRAFT_35324 N 0.000
K443DRAFT_662219 Laccaria amethystina K443DRAFT_662219 N 0.000
LACBIDRAFT_313642 Laccaria bicolor LACBIDRAFT_313642 N 0.000
M404DRAFT_995995 Pisolithus tinctorius M404DRAFT_995995 N 0.000
M407DRAFT_20239 Tulasnella calospora M407DRAFT_20239 N 0.000
M408DRAFT_328654 Serendipita vermifera M408DRAFT_328654 N 0.000
M413DRAFT_446301 Hebeloma cylindrosporum M413DRAFT_446301 N 0.000
M422DRAFT_173033 Sphaerobolus stellatus M422DRAFT_173033 N 0.000
Moror_6251 Moniliophthora roreri Moror_6251 N 0.000
PAXRUDRAFT_825716 Paxillus rubicundulus PAXRUDRAFT_825716 N 0.000
PHACADRAFT_174788 Phanerochaete carnosa PHACADRAFT_174788 N 0.000
PHLGIDRAFT_99458 Phlebiopsis gigantea PHLGIDRAFT_99458 N 0.000
PISMIDRAFT_28197 Pisolithus microcarpus PISMIDRAFT_28197 N 0.000
PLEOSDRAFT_1112903 Pleurotus ostreatus PLEOSDRAFT_1112903 N 0.000
POSPLDRAFT_104953 Postia placenta POSPLDRAFT_104953 N 0.000
POSPLDRAFT_104955 Postia placenta POSPLDRAFT_104955 N 0.000
SCHCODRAFT_83015 Schizophyllum commune SCHCODRAFT_83015 N 0.000
SCLCIDRAFT_13363 Scleroderma citrinum SCLCIDRAFT_13363 N 0.000
SERLA73DRAFT_122259 Serpula lacrymans SERLA73DRAFT_122259 N 0.000
V565_091980 Rhizoctonia solani V565_091980 N 0.000