gw1.22.128.1 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.22.128.1 T334244_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.22.128.1 Sox 1 44
gw1.22.128.1 Sox 65 134

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.8.211.1 Fragilariopsis cylindrus e_gw1.8.211.1 N 0.421
e_gw1.9.903.1 Fragilariopsis cylindrus e_gw1.9.903.1 N 0.441
fgenesh2_kg.8_#_22_#_1744_1_CCUX_EXTA Fragilariopsis cylindrus fgenesh2_kg.8_#_22_#_1744_1_CCUX_EXTA N 0.510
gw1.9.389.1 Fragilariopsis cylindrus gw1.9.389.1 N 0.425
Thaps36301 Thalassiosira pseudonana Thaps36301 N 0.443