Ocbimv22028394m.g (Octopus bimaculoides)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ocbimv22028394m.g T334323_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22028394m.p Sox 3 57

Links

Other Sox family TFs
Other Octopus bimaculoides TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006856 Oryza indica BGIOSGA006856 N
BRADI3G08280 Brachypodium distachyon BRADI3G08280 N
F775_18168 Aegilops tauschii F775_18168 N
GRMZM2G170559 Zea mays GRMZM2G170559 N
GRMZM2G340177 Zea mays GRMZM2G340177 N
LPERR02G07820 Leersia perrieri LPERR02G07820 N
OGLUM02G09240 Oryza glumaepatula OGLUM02G09240 N
OMERI02G10300 Oryza meridionalis OMERI02G10300 N
ONIVA11G03290 Oryza nivara ONIVA11G03290 N
OPUNC02G08070 Oryza punctata OPUNC02G08070 N
OS02G0221100 Oryza sativa OS02G0221100 N
Pavir.J30600 Panicum virgatum Pavir.J30600 N
Pavir.J40109 Panicum virgatum Pavir.J40109 N
Sb04g007795 Sorghum bicolor Sb04g007795 N
Sb10g022530 Sorghum bicolor Sb10g022530 N
Si007981m.g Setaria italica Si007981m.g N
Si019540m.g Setaria italica Si019540m.g N
Traes_6AS_4D5775944 Triticum aestivum Traes_6AS_4D5775944 N
TRIUR3_19577 Triticum urartu TRIUR3_19577 N