CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22038009m.g
(
Octopus bimaculoides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Ocbimv22038009m.g
T334334_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22038009m.p
Sox
342
410
KPKPMTPFRLYIESHRKKALKKFPQLRQINILNRLSKQWISLDNKKKMKYIVQAQDWEKKYLEEVKEYK
Ocbimv22038009m.p
Sox
458
502
DVKSTERMKGLSKIFNDLPAAVKEDYENRNRLEKIEYQEKVYEYV
Ocbimv22038009m.p
Sox
528
590
RSRPASAFLLYYSENKDSLPDLCKTERYKTLQKRWKLLPKASQESYKLQRKEMHKSLKSKTGK
Ocbimv22038010m.p
Sox
299
367
KPKPMTPFRLYIESHRKKALKKFPQLRQINILNRLSKQWISLDNKKKMKYIVQAQDWEKKYLEEVKEYK
Ocbimv22038010m.p
Sox
415
459
DVKSTERMKGLSKIFNDLPAAVKEDYENRNRLEKIEYQEKVYEYV
Ocbimv22038010m.p
Sox
485
547
RSRPASAFLLYYSENKDSLPDLCKTERYKTLQKRWKLLPKASQESYKLQRKEMHKSLKSKTGK
Ocbimv22038011m.p
Sox
301
369
KPKPMTPFRLYIESHRKKALKKFPQLRQINILNRLSKQWISLDNKKKMKYIVQAQDWEKKYLEEVKEYK
Ocbimv22038011m.p
Sox
417
461
DVKSTERMKGLSKIFNDLPAAVKEDYENRNRLEKIEYQEKVYEYV
Ocbimv22038011m.p
Sox
487
549
RSRPASAFLLYYSENKDSLPDLCKTERYKTLQKRWKLLPKASQESYKLQRKEMHKSLKSKTGK
Ocbimv22038012m.p
Sox
258
326
KPKPMTPFRLYIESHRKKALKKFPQLRQINILNRLSKQWISLDNKKKMKYIVQAQDWEKKYLEEVKEYK
Ocbimv22038012m.p
Sox
374
418
DVKSTERMKGLSKIFNDLPAAVKEDYENRNRLEKIEYQEKVYEYV
Ocbimv22038012m.p
Sox
444
506
RSRPASAFLLYYSENKDSLPDLCKTERYKTLQKRWKLLPKASQESYKLQRKEMHKSLKSKTGK
Links
Other
Sox
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy