CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10023090.g
(
Linum usitatissimum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Lus10023090.g
T334569_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10023090
Sox
176
242
MKRPSTPYILWSKDQWAEIKKANPNADFKETSNILGAKWKTVTAEEKKPYEEKYRAEKEAYLKVMAM
Links
Other
Sox
family TFs
Other
Linum usitatissimum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA033046
Oryza indica
BGIOSGA033046
N
0.000
GRMZM2G001577
Zea mays
GRMZM2G001577
N
0.000
OB10G18990
Oryza brachyantha
OB10G18990
N
0.000
OBART10G11680
Oryza barthii
OBART10G11680
N
0.000
OGLUM10G11420
Oryza glumaepatula
OGLUM10G11420
N
0.000
OLONG_009446
Oryza longistaminata
OLONG_009446
N
0.000
OMERI10G08650
Oryza meridionalis
OMERI10G08650
N
0.000
ONIVA10G10850
Oryza nivara
ONIVA10G10850
N
0.000
OPUNC10G09950
Oryza punctata
OPUNC10G09950
N
0.000
ORGLA10G0102900
Oryza glaberrima
ORGLA10G0102900
N
0.000
ORUFI10G12190
Oryza rufipogon
ORUFI10G12190
N
0.000
Sb01g020505
Sorghum bicolor
Sb01g020505
N
0.000