CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10035991.g
(
Linum usitatissimum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Lus10035991.g
T334584_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10035991
Sox
36
66
PKRPPSAFFVFMAEFREQFKEQNPNNKSVAA
Lus10035991
Sox
61
90
NKSVAADKAPYKEKADKKKSEYEKTIDAYN
Links
Other
Sox
family TFs
Other
Linum usitatissimum
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI002959
Acyrthosiphon pisum
ACYPI002959
N
0.000
CLEC012958
Cimex lectularius
CLEC012958
N
0.000
GB50048
Apis mellifera
GB50048
N
0.000
HHAL003515-PA
Halyomorpha halys
HHAL003515-PA
N
0.000
ISCW019047
Ixodes scapularis
ISCW019047
N
0.000
L798_02049
Zootermopsis nevadensis
L798_02049
N
0.000
LDEC001996
Leptinotarsa decemlineata
LDEC001996
N
0.000
PHUM461050
Pediculus humanus
PHUM461050
N
0.000
PPAI001250
Phlebotomus papatasi
PPAI001250
N
0.000
RPRC010858
Rhodnius prolixus
RPRC010858
N
0.000
SMAR000814
Strigamia maritima
SMAR000814
N
0.000
TC012464
Tribolium castaneum
TC012464
N
0.000
YQE_12847
Dendroctonus ponderosae
YQE_12847
N
0.000