Pavir.J10741 (Panicum virgatum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Pavir.J10741 T334686_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J10741.1.p Sox 575 643

Links

Other Sox family TFs
Other Panicum virgatum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG011625.1 Alligator sinensis Alligator_sinensis_CCG011625.1 N
ZNF341 Anolis carolinensis ENSACAG00000008818 N
ENSAPLG00000012237 Anas platyrhynchos ENSAPLG00000012237 N
ZNF341 Gallus gallus ENSGALG00000002968 N
ZNF341 Meleagris gallopavo ENSMGAG00000002423 N
ZNF341 Monodelphis domestica ENSMODG00000002856 N
ENSPSIG00000005867 Pelodiscus sinensis ENSPSIG00000005867 N
Pvit_05437 Pogona vitticeps Pvit_05437 N