SapurV1A.3336s0010 (Salix purpurea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SapurV1A.3336s0010 T334723_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.702 0.932
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.673 0.932
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.673 0.932
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.660 0.682
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.660 0.682
INO
M02485_2.00 		Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN		 PBM
Weirauch et al.(2014)
pTH7516 		0.596 0.750
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.3336s0010.1.p Sox 109 152
SapurV1A.3336s0010.2.p Sox 108 151
SapurV1A.3336s0010.3.p Sox 59 102

Links

Other Sox family TFs
Other Salix purpurea TFs

520 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006569 Calypte anna Aan_R006569 N
Afo_R014584 Aptenodytes forsteri Afo_R014584 N
Alligator_sinensis_CCG014093.1 Alligator sinensis Alligator_sinensis_CCG014093.1 N
Brh_R010606 Buceros rhinoceros Brh_R010606 N
ASCL3 Anolis carolinensis ENSACAG00000009879 N
ENSAMEG00000019915 Ailuropoda melanoleuca ENSAMEG00000019915 N
ENSAPLG00000001043 Anas platyrhynchos ENSAPLG00000001043 N
ASCL3 Bos taurus ENSBTAG00000032339 N
ASCL3 Canis familiaris ENSCAFG00000024403 N
ASCL3 Callithrix jacchus ENSCJAG00000011693 N
ASCL3 Cavia porcellus ENSCPOG00000011108 N
ENSCSAG00000019329 Chlorocebus sabaeus ENSCSAG00000019329 N
ENSCSAVG00000009227 Ciona savignyi ENSCSAVG00000009227 N
ASCL3 Dasypus novemcinctus ENSDNOG00000025092 N
ENSDORG00000013306 Dipodomys ordii ENSDORG00000013306 N
ASCL3 Equus caballus ENSECAG00000008707 N
ENSFALG00000014620 Ficedula albicollis ENSFALG00000014620 N
ASCL3 Felis catus ENSFCAG00000008414 N
ASCL3 Homo sapiens ENSG00000176009 N
ENSLACG00000017099 Latimeria chalumnae ENSLACG00000017099 N
ASCL3 Loxodonta africana ENSLAFG00000010672 N
ENSMEUG00000016296 Macropus eugenii ENSMEUG00000016296 N
ASCL3 Meleagris gallopavo ENSMGAG00000006388 N
ENSMICG00000005296 Microcebus murinus ENSMICG00000005296 N
ASCL3 Myotis lucifugus ENSMLUG00000014718 N
ASCL3 Macaca mulatta ENSMMUG00000001997 N
ASCL3 Monodelphis domestica ENSMODG00000024589 N
Ascl3 Mus musculus ENSMUSG00000035951 N
ENSNLEG00000017548 Nomascus leucogenys ENSNLEG00000017548 N
ASCL3 Ornithorhynchus anatinus ENSOANG00000003112 N
ENSOARG00000017152 Ovis aries ENSOARG00000017152 N
ASCL3 Oryctolagus cuniculus ENSOCUG00000011310 N
ASCL3 Otolemur garnettii ENSOGAG00000014012 N
ASCL3 Ochotona princeps ENSOPRG00000004802 N
ENSP00000318846 Macaca fascicularis ENSP00000318846 N
ENSP00000318846-D1 Bos grunniens ENSP00000318846-D1 N
ENSPANG00000002749 Papio anubis ENSPANG00000002749 N
ASCL3 Procavia capensis ENSPCAG00000014597 N
ENSPMAG00000008115 Petromyzon marinus ENSPMAG00000008115 N
ENSPPYG00000003501 Pongo abelii ENSPPYG00000003501 N
ASCL3 Pan troglodytes ENSPTRG00000003339 N
ASCL3 Pteropus vampyrus ENSPVAG00000000414 N
ASCL3 Sorex araneus ENSSARG00000005318 N
ENSSHAG00000018108 Sarcophilus harrisii ENSSHAG00000018108 N
ASCL3 Sus scrofa ENSSSCG00000014572 N
ENSSTOG00000002499 Ictidomys tridecemlineatus ENSSTOG00000002499 N
ASCL3 Tupaia belangeri ENSTBEG00000004929 N
ASCL3 Taeniopygia guttata ENSTGUG00000008324 N
ENSTSYG00000006425 Tarsius syrichta ENSTSYG00000006425 N
Gfo_R011835 Geospiza fortis Gfo_R011835 N
Myotis_brandtii_ASCL3_10026847 Myotis brandtii Myotis_brandtii_ASCL3_10026847 N
Ogr18889 Ophisaurus gracilis Ogr18889 N
Pvit_03791 Pogona vitticeps Pvit_03791 N
Tal_R007401 Tyto alba Tal_R007401 N