CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HHAL010521-PA
(
Halyomorpha halys
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HHAL010521-PA
T334854_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN
NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.455
0.551
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HHAL010521-PA
Sox
66
134
PRQPLTGYVRFLNDRREKFRAENPNMPFAEITKVLAAEWSALPHDQKQQYLIAAEQDRERYLQEVAAYK
Links
Other
Sox
family TFs
Other
Halyomorpha halys
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_04224
Capronia coronata
A1O1_04224
N
A1O3_01194
Capronia epimyces
A1O3_01194
N
A1O5_08170
Cladophialophora psammophila
A1O5_08170
N
A1O7_02593
Cladophialophora yegresii
A1O7_02593
N
G647_05780
Cladophialophora carrionii
G647_05780
N
HMPREF1120_08374
Exophiala dermatitidis
HMPREF1120_08374
N
PV04_02758
Capronia semiimmersa
PV04_02758
N
PV05_07267
Exophiala xenobiotica
PV05_07267
N
PV06_07597
Exophiala oligosperma
PV06_07597
N
PV08_07816
Exophiala spinifera
PV08_07816
N
Z517_04513
Fonsecaea pedrosoi
Z517_04513
N
Z518_01891
Rhinocladiella mackenziei
Z518_01891
N
Z519_09394
Cladophialophora bantiana
Z519_09394
N