CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDOA008474
(
Musca domestica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
MDOA008474
T335860_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA008474-PA
Sox
1335
1400
TKKSLTGYILYSSEHRKGICTANPDASFGDISRMVGNEWKNLPASVKQAWEDRAQRINEETKARFE
Links
Other
Sox
family TFs
Other
Musca domestica
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.000
BGIOSGA018023
Oryza indica
BGIOSGA018023
N
0.000
BRADI2G24790
Brachypodium distachyon
BRADI2G24790
N
0.000
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.000
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.000
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.000
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.000
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.000
F775_32837
Aegilops tauschii
F775_32837
N
0.000
GRMZM2G104400
Zea mays
GRMZM2G104400
N
0.000
GRMZM2G456568
Zea mays
GRMZM2G456568
N
0.000
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
0.000
LPERR05G13650
Leersia perrieri
LPERR05G13650
N
0.000
mgf025137m
Mimulus guttatus
mgf025137m
N
0.000
OB05G25040
Oryza brachyantha
OB05G25040
N
0.000
OBART05G17230
Oryza barthii
OBART05G17230
N
0.000
OGLUM05G18240
Oryza glumaepatula
OGLUM05G18240
N
0.000
OMERI05G14890
Oryza meridionalis
OMERI05G14890
N
0.000
ONIVA05G17930
Oryza nivara
ONIVA05G17930
N
0.000
OPUNC05G15090
Oryza punctata
OPUNC05G15090
N
0.000
ORGLA05G0148600
Oryza glaberrima
ORGLA05G0148600
N
0.000
ORUFI05G18410
Oryza rufipogon
ORUFI05G18410
N
0.000
OS05G0426200
Oryza sativa
OS05G0426200
N
0.000
Pavir.J02083
Panicum virgatum
Pavir.J02083
N
0.000
Pavir.J07259
Panicum virgatum
Pavir.J07259
N
0.000
Pavir.J18990
Panicum virgatum
Pavir.J18990
N
0.000
Sb09g020880
Sorghum bicolor
Sb09g020880
N
0.000
Si001354m.g
Setaria italica
Si001354m.g
N
0.000
Traes_1AL_C4FA8404A
Triticum aestivum
Traes_1AL_C4FA8404A
N
0.000
Traes_1DL_F410CF9FD
Triticum aestivum
Traes_1DL_F410CF9FD
N
0.000
Traes_5AL_41B98AAEF
Triticum aestivum
Traes_5AL_41B98AAEF
N
0.000
TRIUR3_22935
Triticum urartu
TRIUR3_22935
N
0.000