CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000998001
(
Ascaris lumbricoides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ALUE_0000998001
T335946_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000998001-mRNA-1
Sox
3
71
KKRRSNGFMYFAEAMRATYEAENSANQLSTKRLMERANKDWKAMNDEQREKWIAECRRRKEEYQKHVYK
Links
Other
Sox
family TFs
Other
Ascaris lumbricoides
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0000454201
Anisakis simplex
ASIM_0000454201
N
0.603
ASU_09388
Ascaris suum
ASU_09388
N
0.741
Bm8815
Brugia malayi
Bm8815
N
0.512
LOAG_10530
Loa loa
LOAG_10530
N
0.476
nAv.1.0.1.g09220
Acanthocheilonema viteae
nAv.1.0.1.g09220
N
0.443
nDi.2.2.2.g09932
Dirofilaria immitis
nDi.2.2.2.g09932
N
0.526
nLs.2.1.2.g07623
Litomosoides sigmodontis
nLs.2.1.2.g07623
N
0.517
nOo.2.0.1.g08720
Onchocerca ochengi
nOo.2.0.1.g08720
N
0.526
PEQ_0000634001
Parascaris equorum
PEQ_0000634001
N
0.629
TCLT_0000719801
Thelazia callipaeda
TCLT_0000719801
N
0.513
WBGene00249373
Onchocerca volvulus
WBGene00249373
N
0.526
WUBG_12231
Wuchereria bancrofti
WUBG_12231
N
0.469