CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HCOI01912600
(
Haemonchus contortus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HCOI01912600
T336405_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMG-1
M02720_2.00
Pisum sativum
STYGTDHTY
RADHACRAS
SELEX
Mathelier et al.(2014)
MA0044.1
0.422
0.362
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01912600.t1
Sox
23
91
PKRALSAFFFFSQDRRPEVQQMHPEWKVGQVAQELGRMWKNVSMDEKDMYERKALADKERYAEEMRDYK
Links
Other
Sox
family TFs
Other
Haemonchus contortus
TFs
258 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_08731
Capronia coronata
A1O1_08731
I
A1O3_08120
Capronia epimyces
A1O3_08120
I
A1O5_04644
Cladophialophora psammophila
A1O5_04644
I
A1O7_03252
Cladophialophora yegresii
A1O7_03252
I
A1O9_02495
Exophiala aquamarina
A1O9_02495
I
AB03633.1
Alternaria brassicicola
AB03633.1
I
ACRE_015620
Acremonium chrysogenum
ACRE_015620
I
AOL_s00086g1
Arthrobotrys oligospora
AOL_s00086g1
I
ARB_03466
Arthroderma benhamiae
ARB_03466
I
AUEXF2481DRAFT_64995
Aureobasidium subglaciale
AUEXF2481DRAFT_64995
I
BAUCODRAFT_47223
Baudoinia compniacensis
BAUCODRAFT_47223
I
Bcin03g02160
Botrytis cinerea
Bcin03g02160
I
BDDG_07949
Blastomyces dermatitidis
BDDG_07949
I
ACLA_024020
Aspergillus clavatus
CADACLAG00001897
I
ACLA_092100
Aspergillus clavatus
CADACLAG00008293
I
CADAFLAG00007216
Aspergillus flavus
CADAFLAG00007216
I
AFUA_1G11620
Aspergillus fumigatus
CADAFUAG00007545
I
CADANGAG00005978
Aspergillus niger
CADANGAG00005978
I
CADANGAG00006707
Aspergillus niger
CADANGAG00006707
I
ANIA_04558
Aspergillus nidulans
CADANIAG00005880
D
CADAORAG00008631
Aspergillus oryzae
CADAORAG00008631
I
CADAORAG00009053
Aspergillus oryzae
CADAORAG00009053
I
ATEG_06908
Aspergillus terreus
CADATEAG00001478
I
ATEG_00354
Aspergillus terreus
CADATEAG00006864
I
NFIA_013920
Neosartorya fischeri
CADNFIAG00001881
I
CaO19.2280
Candida albicans
CaO19.2280
N
CaO19.9820
Candida albicans
CaO19.9820
N
CD36_21500
Candida dubliniensis
CD36_21500
N
CFIO01_13087
Colletotrichum fioriniae
CFIO01_13087
I
CGGC5_6589
Colletotrichum gloeosporioides
CGGC5_6589
I
CH063_05908
Colletotrichum higginsianum
CH063_05908
I
CHGG_02417
Chaetomium globosum
CHGG_02417
I
CIMG_01795
Coccidioides immitis
CIMG_01795
I
CMQ_5874
Grosmannia clavigera
CMQ_5874
I
Cob_03112
Colletotrichum orbiculare
Cob_03112
I
COCC4DRAFT_207933
Bipolaris maydis
COCC4DRAFT_207933
I
COCCADRAFT_94387
Bipolaris zeicola
COCCADRAFT_94387
I
COCMIDRAFT_8258
Bipolaris oryzae
COCMIDRAFT_8258
I
COCSADRAFT_150882
Bipolaris sorokiniana
COCSADRAFT_150882
I
COCVIDRAFT_29056
Bipolaris victoriae
COCVIDRAFT_29056
I
CPC735_046980
Coccidioides posadasii
CPC735_046980
I
CPUR_01168
Claviceps purpurea
CPUR_01168
I
CSUB01_00170
Colletotrichum sublineola
CSUB01_00170
I
DACRYDRAFT_114226
Dacryopinax sp
DACRYDRAFT_114226
I
DICSQDRAFT_139215
Dichomitus squalens
DICSQDRAFT_139215
I
DOTSEDRAFT_67811
Dothistroma septosporum
DOTSEDRAFT_67811
I
DRE_01419
Drechslerella stenobrocha
DRE_01419
I
EPUS_08235
Endocarpon pusillum
EPUS_08235
I
estExt_fgenesh3_pm.C_10763
Neurospora discreta
estExt_fgenesh3_pm.C_10763
I
estExt_Genewise1.C_350071
Cochliobolus heterostrophus C5
estExt_Genewise1.C_350071
I
estExt_Genewise1Plus.C_12162
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_12162
I
estExt_Genewise1Plus.C_12924
Cryphonectria parasitica
estExt_Genewise1Plus.C_12924
I
EURHEDRAFT_449663
Aspergillus ruber
EURHEDRAFT_449663
I
EURHEDRAFT_500027
Aspergillus ruber
EURHEDRAFT_500027
I
e_gw1.00083.116.1
Aspergillus carbonarius
e_gw1.00083.116.1
I
e_gw1.24.57.1
Nectria haematococca
e_gw1.24.57.1
I
e_gw1.5.103.1
Tremella mesenterica
e_gw1.5.103.1
N
F503_00197
Ophiostoma piceae uamh
F503_00197
I
FFUJ_03061
Fusarium fujikuroi
FFUJ_03061
I
fgenesh1_pg.00009_#_206
Aspergillus carbonarius
fgenesh1_pg.00009_#_206
I
fgenesh1_pg.sca_133_unmapped000004
Nectria haematococca
fgenesh1_pg.sca_133_unmapped000004
I
fgenesh1_pm.sca_6_chr9_2_0000181
Nectria haematococca
fgenesh1_pm.sca_6_chr9_2_0000181
I
FGRRES_06810
Fusarium graminearum
FGRRES_06810
I
FOMPIDRAFT_1057254
Fomitopsis pinicola
FOMPIDRAFT_1057254
I
FOXG_02014
Fusarium oxysporum
FOXG_02014
I
FPSE_11855
Fusarium pseudograminearum
FPSE_11855
I
FVEG_05176
Fusarium verticillioides
FVEG_05176
I
G647_05131
Cladophialophora carrionii
G647_05131
I
GALMADRAFT_256803
Galerina marginata
GALMADRAFT_256803
I
GGTG_02610
Gaeumannomyces graminis
GGTG_02610
I
GLRG_03129
Colletotrichum graminicola
GLRG_03129
I
GMDG_00261
Pseudogymnoascus destructans
GMDG_00261
I
GSTUM_00005693001
Tuber melanosporum
GSTUM_00005693001
I
gw1.4.55.1
Mycosphaerella graminicola
gw1.4.55.1
I
H072_1723
Dactylellina haptotyla
H072_1723
I
H101_03088
Trichophyton interdigitale
H101_03088
I
H102_08460
Trichophyton rubrum
H102_08460
I
H105_08489
Trichophyton soudanense
H105_08489
I
HCBG_02620
Histoplasma capsulatum
HCBG_02620
I
HETIRDRAFT_477710
Heterobasidion irregulare
HETIRDRAFT_477710
I
HMPREF1120_04639
Exophiala dermatitidis
HMPREF1120_04639
I
HMPREF1624_04530
Sporothrix schenckii
HMPREF1624_04530
I
JAAARDRAFT_195593
Jaapia argillacea
JAAARDRAFT_195593
I
K437DRAFT_34553
Tilletiaria anomala
K437DRAFT_34553
I
LEMA_P017080.1
Leptosphaeria maculans
LEMA_P017080.1
I
M378DRAFT_103772
Amanita muscaria
M378DRAFT_103772
N
M404DRAFT_1005658
Pisolithus tinctorius
M404DRAFT_1005658
I
M413DRAFT_120145
Hebeloma cylindrosporum
M413DRAFT_120145
I
M413DRAFT_167868
Hebeloma cylindrosporum
M413DRAFT_167868
I
M413DRAFT_446153
Hebeloma cylindrosporum
M413DRAFT_446153
I
M413DRAFT_446160
Hebeloma cylindrosporum
M413DRAFT_446160
I
M413DRAFT_73918
Hebeloma cylindrosporum
M413DRAFT_73918
I
M437DRAFT_53287
Aureobasidium melanogenum
M437DRAFT_53287
I
M438DRAFT_335244
Aureobasidium pullulans
M438DRAFT_335244
I
MAJ_04832
Metarhizium majus
MAJ_04832
I
MAM_00511
Metarhizium album
MAM_00511
I
MAPG_09052
Magnaporthe poae
MAPG_09052
I
MBM_08201
Marssonina brunnea
MBM_08201
I
MCYG_03330
Microsporum canis
MCYG_03330
I
MCYG_03330
Arthroderma otae
MCYG_03330
I
MGG_07450
Magnaporthe oryzae
MGG_07450
I
MGU_08463
Metarhizium guizhouense
MGU_08463
I
MGYG_00493
Microsporum gypseum
MGYG_00493
I
Moror_2492
Moniliophthora roreri
Moror_2492
I
Moror_3407
Moniliophthora roreri
Moror_3407
I
MPH_02048
Macrophomina phaseolina
MPH_02048
I
MPH_05411
Macrophomina phaseolina
MPH_05411
I
MYCFIDRAFT_149027
Pseudocercospora fijiensis
MYCFIDRAFT_149027
I
Mycgr3G10667
Zymoseptoria tritici
Mycgr3G10667
I
MYCTH_2301134
Myceliophthora thermophila
MYCTH_2301134
I
NCU01478
Neurospora crassa
NCU01478
D
NechaG55236
Fusarium solani
NechaG55236
I
NechaG89351
Fusarium solani
NechaG89351
I
NechaG96223
Fusarium solani
NechaG96223
I
NEUTE1DRAFT_56998
Neurospora tetrasperma
NEUTE1DRAFT_56998
I
OCS_03300
Ophiocordyceps sinensis
OCS_03300
I
OIDMADRAFT_111796
Oidiodendron maius
OIDMADRAFT_111796
I
PAAG_05105
Paracoccidioides sp lutzii
PAAG_05105
I
PABG_04552
Paracoccidioides brasiliensis
PABG_04552
I
PaG_01650
Pseudozyma aphidis
PaG_01650
I
PAXINDRAFT_169439
Paxillus involutus
PAXINDRAFT_169439
N
PAXINDRAFT_172061
Paxillus involutus
PAXINDRAFT_172061
N
PAXINDRAFT_31743
Paxillus involutus
PAXINDRAFT_31743
I
PAXRUDRAFT_153943
Paxillus rubicundulus
PAXRUDRAFT_153943
N
Pc13g08420
Penicillium chrysogenum
Pc13g08420
I
Pc18g05390
Penicillium chrysogenum
Pc18g05390
I
PCH_Pc13g08420
Penicillium rubens
PCH_Pc13g08420
I
PCH_Pc18g05390
Penicillium rubens
PCH_Pc18g05390
I
PDE_05378
Penicillium oxalicum
PDE_05378
I
PDE_07240
Penicillium oxalicum
PDE_07240
I
PDIP_30830
Penicillium digitatum
PDIP_30830
I
PDIP_71050
Penicillium digitatum
PDIP_71050
I
PEX1_052050
Penicillium expansum
PEX1_052050
I
PEX1_071460
Penicillium expansum
PEX1_071460
I
PFICI_10867
Pestalotiopsis fici
PFICI_10867
I
PGUG_03208
Candida guilliermondii
PGUG_03208
I
PGUG_03208
Meyerozyma guilliermondii
PGUG_03208
I
PHLGIDRAFT_115686
Phlebiopsis gigantea
PHLGIDRAFT_115686
I
PHSY_004266
Pseudozyma hubeiensis
PHSY_004266
I
PITC_048580
Penicillium italicum
PITC_048580
I
PITC_092550
Penicillium italicum
PITC_092550
I
PMAA_044700
Talaromyces marneffei
PMAA_044700
I
PMAA_044700
Penicillium marneffei
PMAA_044700
I
PSEUBRA_SCAF1g00170
Pseudozyma brasiliensis
PSEUBRA_SCAF1g00170
I
PTRG_00141
Pyrenophora triticirepentis
PTRG_00141
I
PTT_18497
Pyrenophora teres
PTT_18497
I
PV04_03432
Capronia semiimmersa
PV04_03432
I
PV05_05939
Exophiala xenobiotica
PV05_05939
I
PV06_00465
Exophiala oligosperma
PV06_00465
I
PV07_06914
Cladophialophora immunda
PV07_06914
I
PV08_04344
Exophiala spinifera
PV08_04344
I
PV09_02833
Verruconis gallopava
PV09_02833
I
PV10_05946
Exophiala mesophila
PV10_05946
I
PV11_01019
Exophiala sideris
PV11_01019
I
PVAR5_8495
Byssochlamys spectabilis
PVAR5_8495
I
S40285_01567
Stachybotrys chlorohalonata
S40285_01567
I
S40288_02961
Stachybotrys chartarum
S40288_02961
I
SAPIO_CDS9713
Scedosporium apiospermum
SAPIO_CDS9713
I
SBOR_6586
Sclerotinia borealis
SBOR_6586
I
SCHCODRAFT_108853
Schizophyllum commune
SCHCODRAFT_108853
I
SEPMUDRAFT_146834
Sphaerulina musiva
SEPMUDRAFT_146834
I
SERLA73DRAFT_65877
Serpula lacrymans
SERLA73DRAFT_65877
I
SETTUDRAFT_166989
Setosphaeria turcica
SETTUDRAFT_166989
I
SMAC_07049
Sordaria macrospora
SMAC_07049
I
SNOG_14661
Stagonospora nodorum
SNOG_14661
I
SNOG_14662
Phaeosphaeria nodorum
SNOG_14662
I
SOCG_04397
Schizosaccharomyces octosporus
SOCG_04397
I
prt1
Schizosaccharomyces pombe
SPBC530.05
I
SPBR_05546
Sporothrix brasiliensis
SPBR_05546
I
SPOG_01374
Schizosaccharomyces cryophilus
SPOG_01374
N
sr11453
Sporisorium reilianum
sr11453
I
TEQG_00844
Trichophyton equinum
TEQG_00844
I
TESG_08566
Trichophyton tonsurans
TESG_08566
I
THITE_57956
Thielavia terrestris
THITE_57956
I
TRIATDRAFT_295508
Trichoderma atroviride
TRIATDRAFT_295508
I
TRIREDRAFT_2148
Trichoderma reesei
TRIREDRAFT_2148
I
TRIVIDRAFT_33603
Trichoderma virens
TRIVIDRAFT_33603
I
TRV_06120
Trichophyton verrucosum
TRV_06120
I
TSTA_033840
Talaromyces stipitatus
TSTA_033840
I
U727_00431305611
Penicillium solitum
U727_00431305611
I
U727_00431323311
Penicillium solitum
U727_00431323311
I
UCRNP2_488
Neofusicoccum parvum
UCRNP2_488
I
UCRPA7_6910
Togninia minima
UCRPA7_6910
I
UHOR_00180
Ustilago hordei
UHOR_00180
I
UM00113
Ustilago maydis
UM00113
I
UREG_05491
Uncinocarpus reesii
UREG_05491
I
V565_126390
Rhizoctonia solani
V565_126390
I
VDAG_08521
Verticillium dahliae
VDAG_08521
I
VDBG_00235
Verticillium albo atrum
VDBG_00235
I
VDBG_00235
Verticillium alfalfae
VDBG_00235
I
VHEMI01078
Torrubiella hemipterigena
VHEMI01078
I
WALSEDRAFT_65411
Wallemia sebi
WALSEDRAFT_65411
I
X797_009540
Metarhizium robertsii
X797_009540
I
Z517_10598
Fonsecaea pedrosoi
Z517_10598
I
Z518_01229
Rhinocladiella mackenziei
Z518_01229
I
Z519_02471
Cladophialophora bantiana
Z519_02471
I