CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000204300
(
Hymenolepis microstoma
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HmN_000204300
T336428_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000204300
Sox
29
79
RKAPVFPAFVKLHFTDVKSKYPELKSTEIMKKLSEMYKATPTSELQKLSSN
HmN_000204300
Sox
111
175
AVTGYQVFIHEQLTGNKGKNLEDMKSKLANASKAWNSLNERSKEPYVIQAVENKLVHLRELRTWC
Links
Other
Sox
family TFs
Other
Hymenolepis microstoma
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
18263_YNL167C
Saccharomyces mikatae
18263_YNL167C
I
18716_YNL167C
Saccharomyces paradoxus
18716_YNL167C
I
20254_YNL167C
Saccharomyces bayanus
20254_YNL167C
I
AACERI_AaceriAFR025C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR025C
I
AGOS_AFR025C
Ashbya gossypii
AGOS_AFR025C
I
CAGL0J06182g
Candida glabrata
CAGL0J06182g
I
Ecym_6410
Eremothecium cymbalariae
Ecym_6410
I
KLLA0_D08030g
Kluyveromyces lactis
KLLA0_D08030g
I
KLTH0B06732g
Lachancea thermotolerans
KLTH0B06732g
I
KLTH0B06732g
Kluyveromyces thermotolerans
KLTH0B06732g
I
KNAG_0F01370
Kazachstania naganishii
KNAG_0F01370
I
LALA0_S12e03994g
Lachancea lanzarotensis
LALA0_S12e03994g
I
NCAS_0G02000
Naumovozyma castellii
NCAS_0G02000
I
SAKL0E12562g
Lachancea kluyveri
SAKL0E12562g
I
Scas_Contig654.5
Saccharomyces castellii
Scas_Contig654.5
I
SKUD_195304
Saccharomyces kudriavzevii
SKUD_195304
I
SU7_2921
Saccharomyces arboricola
SU7_2921
I
TBLA_0D00190
Tetrapisispora blattae
TBLA_0D00190
I
TDEL_0F00740
Torulaspora delbrueckii
TDEL_0F00740
I
SKO1
Saccharomyces cerevisiae
YNL167C
D
ZBAI_00974
Zygosaccharomyces bailii
ZBAI_00974
I
ZBAI_06263
Zygosaccharomyces bailii
ZBAI_06263
I
ZYRO0G05016g
Zygosaccharomyces rouxii
ZYRO0G05016g
I