CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000454200
(
Hymenolepis microstoma
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HmN_000454200
T336433_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000454200
Sox
40
103
PKRPPNAYVLFMQDNVSLWSGDIASFSRKVAAKWKNLDPKQKAIYVNKAHGLMSHYKGSCPNSK
HmN_000454200
Sox
100
144
PNSKCSDYLTFVCQSYKCLRSKHPDWSSQKIMDVIKAEYRRQRSS
Links
Other
Sox
family TFs
Other
Hymenolepis microstoma
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G58100
Brachypodium distachyon
BRADI1G58100
N
F775_01190
Aegilops tauschii
F775_01190
N
F775_01192
Aegilops tauschii
F775_01192
N
F775_01248
Aegilops tauschii
F775_01248
N
F775_02813
Aegilops tauschii
F775_02813
N
F775_02815
Aegilops tauschii
F775_02815
N
TRIUR3_06267
Triticum urartu
TRIUR3_06267
N
TRIUR3_10620
Triticum urartu
TRIUR3_10620
N