CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g16221
(
Steinernema monticolum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L898_g16221
T336572_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g16221.t1
Sox
86
131
YIRKEISDLLRYAHAKWRDLPADEKMGYRTKCRKQNVEMQNVERQN
Links
Other
Sox
family TFs
Other
Steinernema monticolum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_1860002
Branchiostoma floridae
estExt_fgenesh2_pg.C_1860002
N
0.450
maker-nMf.1.1.scaf02291-snap-gene-0.16
Meloidogyne floridensis
maker-nMf.1.1.scaf02291-snap-gene-0.16
N
0.447
WUBG_10398
Wuchereria bancrofti
WUBG_10398
N
0.423