CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000012431
(
Gadus morhua
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02864 (STAT_bind)
IPR013801
ENSGMOG00000012431
T337475_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT1
M08171_2.00
Homo sapiens
HTTCCYRGAAV
BTTCYRGGAAD
ChIP-seq
Mathelier et al.(2014)
MA0137.3
0.722
0.722
STAT1
M08013_2.00
Homo sapiens
NBBNBTTCCHRGAADNSHNNN
NNNDSNHTTCYDGGAAVNVVN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT1_Stanford
0.722
0.722
STAT1
M08014_2.00
Homo sapiens
YTTCCYRGAAR
YTTCYRGGAAR
ChIP-seq
Gerstein et al.(2012)
K562_STAT1_Stanford
0.722
0.722
STAT1
M08229_2.00
Homo sapiens
NTTCYNRGAA
TTCYNRGAAN
ChIP-seq
Contrino et al.(2012)
Mv124
0.722
0.722
STAT1
M08230_2.00
Homo sapiens
RGTTTCRBTT
AAVYGAAACY
ChIP-seq
Contrino et al.(2012)
Mv125
0.722
0.722
STAT1
M09411_2.00
Homo sapiens
HBHNYTTCCNRGAARHSHN
NDSDYTTCYNGGAARNDVD
Misc
Kulakovskiy et al.(2013)
STAT1_HUMAN.H11MO.0.A
0.722
0.722
STAT1
M09642_2.00
Homo sapiens
NHTTCYNRGAADNN
NNHTTCYNRGAADN
Misc
Heinz et al.(2010)
HelaS3-STAT1_GSE12782
0.722
0.722
STAT1
M11348_2.00
Homo sapiens
NSNYAHTTCCSGGAADBBNHV
BDNVVHTTCCSGGAADTRNSN
Transfac
Matys et al.(2006)
V$STAT1_01
0.722
0.722
STAT1
M11349_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_02
0.722
0.722
STAT1
M11350_2.00
Homo sapiens
VNHTTMBN
NVKAADNB
Transfac
Matys et al.(2006)
V$STAT1_03
0.722
0.722
STAT1
M11351_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_05
0.722
0.722
STAT1
M11352_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_07
0.722
0.722
STAT1
M11353_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q4
0.722
0.722
STAT1
M11354_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q6
0.722
0.722
Stat1
M09422_2.00
Mus musculus
HNDBYNTNDBTTTCHNTTYYYY
RRRRAANDGAAAVHNANRVHND
Misc
Kulakovskiy et al.(2013)
STAT1_MOUSE.H11MO.0.A
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000013310
STAT
315
564
MVVERQPCMPTHPQRALVLKTGVQFTVKLRFLVKLQEFNYQLKVKAFFDKDVTEKKGFRKFNILGTNIKVMNMEESNGSLAAEFRHLQLKEQKVAGNRTNEGPLIVTEELHSISFESELQPSQSGLKIKLETLSLPVVVISNVSQLPSGWASILWYNMLTTEPKNLRFFLSPPSATWAQLAEVLSWQFSSVTKRGLNQEQLNMLADKLLGHKAMRKPEGLIPWARFCKQGATEKSFPFWLWMEGILDLIK
Links
Other
STAT
family TFs
Other
Gadus morhua
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000447
Ailuropoda melanoleuca
ENSAMEG00000000447
N
ENSBTAG00000010252
Bos taurus
ENSBTAG00000010252
N
ZNF397
Canis familiaris
ENSCAFG00000017918
N
ZNF397
Callithrix jacchus
ENSCJAG00000021000
N
ENSCSAG00000017904
Chlorocebus sabaeus
ENSCSAG00000017904
N
ZNF397
Equus caballus
ENSECAG00000015789
N
ZNF397
Felis catus
ENSFCAG00000023533
N
ZNF397
Homo sapiens
ENSG00000186812
N
ENSLAFG00000018574
Loxodonta africana
ENSLAFG00000018574
N
ENSMLUG00000016482
Myotis lucifugus
ENSMLUG00000016482
N
ZNF397
Macaca mulatta
ENSMMUG00000020530
N
ENSMPUG00000001181
Mustela putorius furo
ENSMPUG00000001181
N
Zfp397
Mus musculus
ENSMUSG00000024276
N
ENSNLEG00000006278
Nomascus leucogenys
ENSNLEG00000006278
N
ZNF397
Oryctolagus cuniculus
ENSOCUG00000007099
N
ZNF397
Otolemur garnettii
ENSOGAG00000029778
N
ENSP00000331577
Macaca fascicularis
ENSP00000331577
N
ENSPANG00000006799
Papio anubis
ENSPANG00000006799
N
ZNF397
Pteropus vampyrus
ENSPVAG00000017450
N
Zfp397
Rattus norvegicus
ENSRNOG00000048101
N
ENSSARG00000012675
Sorex araneus
ENSSARG00000012675
N
ENSSSCG00000003739
Sus scrofa
ENSSSCG00000003739
N
ENSSTOG00000023511
Ictidomys tridecemlineatus
ENSSTOG00000023511
N
ZNF397
Tupaia belangeri
ENSTBEG00000014907
N
ZNF397
Tursiops truncatus
ENSTTRG00000013486
N
Myotis_brandtii_ZNF397_10017291
Myotis brandtii
Myotis_brandtii_ZNF397_10017291
N