Carubv10025028m.g (Capsella rubella)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04504 (DUF573) IPR007592 Carubv10025028m.g T338990_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GEBP
M02493_2.00 		Arabidopsis thaliana
KCGGCCGD
HCGGCCGM		 PBM
Weirauch et al.(2014)
pTH7529 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10025028m Storekeeper 72 166

Links

Other Storekeeper family TFs
Other Capsella rubella TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_661 Arabidopsis lyrata Al_scaffold_0004_661 I
GPL1 Arabidopsis thaliana AT2G25650 I 0.758
GEBP Arabidopsis thaliana AT4G00270 D 0.768
Bostr.2902s0164 Boechera stricta Bostr.2902s0164 I 0.747
Bostr.5022s0117 Boechera stricta Bostr.5022s0117 N
Cagra.3166s0035 Capsella grandiflora Cagra.3166s0035 I 0.747
Cagra.8436s0001 Capsella grandiflora Cagra.8436s0001 I 1.000